Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2298 |
Symbol | gpr |
ID | 4201287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2546916 |
End bp | 2547893 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638083163 |
Product | germination protease |
Protein accession | YP_696721 |
Protein GI | 110800865 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01441] GPR endopeptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACAATG TAAGAACTGA TTTAGCTGTT GAAAGTAGAG AGATTTATAA ACATAGATAT AATAGGGAAA TTGATGGGGT AGTTTTTGAA GAAAAGACTG TGGAAGAAGA TATTAAAGTT ACAAATGTTG ACATATTAAA TGAGGAAGGT GCTAAAGCTA TGGGAAAACC TATAGGCAGA TATGTTACCA TAGATATCCC TGAGTACACT CATTATGATG GTGGCATTAT GGATGAGGTT TCTCATGTGG TAGCAGCCTC CTTAGAAGAA CTTATTAATT TACCAGAGGA GAGAACGGCT TTAGTAGTTG GGCTTGGAAA CTGGAATGTT ACACCTGACG CCATAGGACC TAAGGTTGTA GGAAAATTAA TGGTAACAAG ACATTTAAAG AAGGTTATGC CAGACATAAT AGATGATTCA GTAAGGCCAG TTTGCGCTAT AGCTCCTGGA GTTTTAGGTA TAACAGGAAT TGAAACTGGA GAGATAATAA AATCATTAGT TGAAAAGATA AATCCAGATT TAGTAGTTTG TATTGATGCC TTAGCTTCAA GAAAACTAGA AAGAGTGGCA AGAACTATTC AAATAAGTAA TACTGGAATA TCACCAGGGG CTGGAGTTGG AAATCATAGA ATGCAAATAA ATGAAGAAAG CTTAGGTATC CCTGTTATTG CCTTAGGAGT ACCAACTGTT GTGGATGCAG CTACTATTGC AAATGATGCC ATGGATTTAG TTTTAGATGA AATGATAAAT CAAGCAGATG CTGGCAAAGA ATTTTATAAT ATATTAAATA ACATAGACAA GAATGAAAAG GGAATGATGA TAAAGAGCCT TTTAGACCCT TATGTAGGAG ACTTAATGGT TACTCCAAAG GAAATAGACG ATATAATAGA ATCAGTTTCA AAAATAATAG CAAATGGAAT CAATATAGCC CTTCAACCTA ATATGGTATT AGAGGATATA AATAAATTTT TAAACTAA
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Protein sequence | MYNVRTDLAV ESREIYKHRY NREIDGVVFE EKTVEEDIKV TNVDILNEEG AKAMGKPIGR YVTIDIPEYT HYDGGIMDEV SHVVAASLEE LINLPEERTA LVVGLGNWNV TPDAIGPKVV GKLMVTRHLK KVMPDIIDDS VRPVCAIAPG VLGITGIETG EIIKSLVEKI NPDLVVCIDA LASRKLERVA RTIQISNTGI SPGAGVGNHR MQINEESLGI PVIALGVPTV VDAATIANDA MDLVLDEMIN QADAGKEFYN ILNNIDKNEK GMMIKSLLDP YVGDLMVTPK EIDDIIESVS KIIANGINIA LQPNMVLEDI NKFLN
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