| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1618 |
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| Symbol | |
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| ID | 4202972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1830780 |
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| End bp | 1835912 |
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| Gene Length | 5133 bp |
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| Protein Length | 1710 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638082496 |
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| Product | OB-fold nucleic acid binding domain-containing protein |
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| Protein accession | YP_696061 |
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| Protein GI | 110800195 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGG ATTATAAGAT TTTAATAACT AAAGCATTAT CCTTAAGCAT GGTAGGAAGT
TTATTTACAT CTTATCCTAC TTTTGCTAAG GAATTTAAAG CACAAGAGGG AGACTTAATA
ATATCTGAAT ATTTACATGG ACCATCTAAT TCAAAGGCTA TTGAAATATT TAATGGAACA
GGGGAAGGAA TAAATCTTTC TAATTATGAT TTGGCTGTAT ATTCAAATGG AAAATATGAG
GGGAGTCCAG TTTCTCAAAG TTTAGAAGAT AAGATTATAG AAAGTGGAGA GACTTATGTA
ATTTACAATA ACCAAGGAAA AGATGAAAAA TTTACTGAGG TTATAAATGA TTTAGAAAAT
AAATTAGGGG TAGGAAGCCA AACAGTAGGT TTCAATGGTG ATGATGTTAT ATTACTTAGA
AAAAATACTG GAAATGGATA CGAAATAATA GACTCCTTTG GAGCTAAGAC AGAAAAAGAT
AAAAAGTTTT ATGATAGTAA ATTCATAAGT GCTAGAAGAA AATCTGAAAT AAAAGATGGT
GAAAATAACA TAGATAAAAC ACCATTTGAT GTTTCTATTC AATGGGATGT AGATACAGAA
AATTTATATG ATGATTTAGG AAAGCATGAT ATTTCATGGA GTGAAGGAGA AAATCCTTCA
GGAAAAGTTC TTAAGGTAAA GGAAGCAAGA AATAAAAACT TAGGAGAGGA AGTTACTACA
AGAGGTGTTG TAACTTTTAA TGATAGAAAT AAAACTCTTC ATATACAGGA TGAAACAGGA
GCTATTGCAA TTTCAAACTT TAAATCAGGA GTGGATTTTG GAGCAATAAC TAAGGGGAAT
AAGATTGAAA TAAGTGGCAC ATTAGATAAT TTTAATGGAT TACTTCAAGT ACAAGCTACT
GATATAAAAG TCTTAGGAGA TTTAGGAATG CCTGATCCTA AGTTAGTTAC TATTAAGGAA
TTAAAAGAGT CAAATTTTGA TTCTCATTAT ATTGAGTTGA AAAATACAGT AGTTGATTTA
GAAGCTAAAA CATTAACACA AGGAGAGGAT GTTTTAGATA TTTACTTTAT ACCTTCAGGT
TTAGAGGTTA AAACAGGAGA TTTAGTAGAT GTAAAAGGCG TTATTGGAAG ATTCAATGAT
AAAGTTCAAC TTTATGGTTC TTCAGCAGAG TTTACAAAAA TAGTTGAAGA TAATGAAAGT
CCTGTAATAA CTCATAAAAA AATTGAAAAG GCCAATATAA ACGAAGATTT AAACATTGAA
GCTAAAGTAA GTGATAATAA TAAATTAGAA GAGGTATCTA TTAGCTTTAA GGGAAAAGAG
GATACTGAAT TTAAAAAAGT AGTATTAAAA GAGGAAGATG GAATATTTAA AACTTTAATA
CCTAAGGAAG ATTTAAAAGC TTCTGGAATG GAATATTATA TTAAAGCTAG TGATGGTAAA
AATATTTCAA GAGTACCAGA AAGTGGAGTA TATGCTTTTC AGGTAGTAGA CGAAGACTTA
AGTGGACCAG AGGTTAAGAA TGTTTTACCT AAGGAAAACT CAAGTGTAGG AGAAAACAGA
AAACCTATTA TAAGTGGAGA ATTTATAGAT AATTCTGGAG TAAATGTAGA AAGTGTAAAA
ATTAAATTAG ATAATGAAGA CATAACTAAA GTAGCTGAAA TAACAGAAAC TGGTTTTTCA
TATGAGATTA AGGAAGACTT AGAGGATGGA GAACATAGAG TGGAAGTTAG TGTAAGTGAT
TCTTTAGGAA ATAATAGGGT GAAAGAATGG AAGTTTAGAG TAGGAAAGAT AAATCATTAT
TATGGACAAC TACATTCACA TACTAATATT TCAGATGGAA CTGGAAGCTT AGAGGATGCT
TATAAATGGG CAAGAGATGA AGGTAAGGCT GATTATTTTG CCGTAACAGA CCATTCAAAC
TGGTTTGATA ATGATACTGA AGCTAATATA AATGATGGAT CAATGAGTAA AGCTTGGACT
AATGCTCAAA ATATATCTGA TAAATATAAT GATGATGGTA ACTTTGTTGC TATGTATGGT
TATGAAATGA CTTGGTCAGG ATCTACTGGA GGCTGGGGAC ATATAAATAC ATTTAATACT
CCAGGATTTG AAACAAGAAA AAATAGTGAT ATGAATTTAA AAAATTATTA TAATACTATT
TCTCAATTAC CAGAGTCAGT TTCTCAATTA AATCATCCAG GAAAAACTTT TGGCGATTTT
GCAGACTTTG GTTTTTATAG TGAAGGGGCA GACAAGGTAG TTAATTTAAT AGAGGTTGGA
AATGGAGAAG GACCTGTAAG AGGTAGTGGA TATTTCCCAA GCTATGAATA TTATACAAGA
GCTTTAGATA AGGGATGGCA TGTTGCTCCT ACTAATAACC AAGATAATCA TAAGGGAAAA
TGGCTTACAG CAAATGATGC TAGAACAATA ATATTATCAG AAGAAAATTC AAGGGATGCT
TTATATAAAG CTATGAACAA AAAGCAAGTG TATTCTTCAG AGGATAAGAA TACGACTATT
GATTATACTG TTAATAATCA AATAATGGGA AGCAATTTAG GTGAAGTAGA AGACTTAGAT
TTTAATATAG AAATAAATGA TGAGGATAAA GAGGATACTA TAAAGAAAGT TTCAATAATA
GCTAATGGTG GAGTAGAGGT CATTTCAAAG GAATTTAATA GCAATAAAGT TTCTTGGAAT
TTTAAGCTTA AACCTGAATA TAGCTACTAT TATGTGAAAG TAGTACAAGG AGATCAAGAT
ATTGCAGTTA CAGCTCCAGT ATGGATTGGG GAAAATGTAA ATGTAGGATT AAATGAATTA
AAAACTGATA AAGATATGCT TTTAGTTGGT GACGAGGCTA AATTCTCAAT AGAAGTTTAT
AATAATAGTT CTGAAAGATT AAACAATATA AAGGTTGAAT TCTTCAATGG AGAAATTTCA
GGTGAGAAGA AAATTGGAGA AGAAATTATA GAAAGCTTAG AAGGAAATAG CTTAAAGGAA
AGTTCTATAA CATGGCAACC TGAAAGAGCA GGAGAATTTA CTATTTATGC AAAAGCTACA
ATTTCAATAA ATGGAACAGA CAAGACATTT ACTAAGAGTT CTAAGATAGA AGTTGTAAAT
GAAGGTGATG TTTATAAGGT AATGATAGAT GGGGCTCATG CTAATCAATA TGTAACAGGA
AACTATGCAG GAAAAATAGA TGCTTTTGAA AAGTTATTAA CAGAAAATGA TTGTATTCCT
ATAATAAACA AAGAAGAAAT AACAGAGAAA TCTTTAGAAA ATGTTGACCT ATTAGTTATA
ACTGATCCTC AAGGAATTGA TGAGCCTAAG TATGAAGTTT ACAAAAGTAA TTTTACAGCC
TCAGAAATTG ACGCAATAGG AAAATACATG GATAAGGGTG GAAATATAAT CATTACATCA
AGGGCAGATT ATAAAGATGG AGTTGGAGAG TATAGTAATG GTGCTCAATT AAATCCTATT
TTAGAGAAGA TAAATTCAGA ATTAAGAGTA AATGATGACC AAGTTGCAGA TTATGAAGTT
AATGAAGGAC AACAATTTAG ACTTATGTTA AATAAGTATT CTTCTCCTAA CTTTAATCTT
GTTGAAGGAT TAGGTGAAGA GGATAAATTT AGCTTCTATA GTGGATCATC AGTAGTATTA
AAGGATGGAG CTAAGGGAGA AAAGGTTGAC TTCTTAGTAA GTGGTCATGA ATCTACAGGA
ACAGATGATT CAGATAAACA AGGGGATAAT GTTCCAGTAG AAAAAGGACA AGTTAATGTT
TTAGCAGTAG AAGAATTATC TAATGGAGGA AAGGTAGCCG TAGCTGGAAG TACTTTCTTC
TCAAACTTTG AAATAGATGG AACTAATGCT GAAAGTAAAA GCAATAGTAA GGTAACAAAA
AATATAATAA ATTGGATGTT GCCTGAAAAA GAATTAGAAA AGCTTACTAT TAAAGAATTT
AGAGAAGATA AAAATAATGA TGGAGAACCA GATAGATTAG GAGAAGAGTA TGTTTTAGAG
GGAATAGTAA CAGCTCAGTC AGAGGCTGTA GAACCTAAAA ATGCTTTCTT TGAAGTTATA
TACATTCAAG ATGAAACTGG TGGAATAAAT GTTTTTGGTG TTTCTAATAC TCCTGTAAAA
GTTGGACAAA AAGTAAGAGT TAAGGGAAGA GTAGAAGCAT ACCAAGGTGA ATTTGAAATA
CAAATAAGTG ATGAAAGTGC AGATTTAGAG ATAATTGATG AAAATATAAA TGAAGTGAGT
CCTAAAGAAA TGAGCACTGG GGATAGTATG CTTCATGAAA ATGAAGGATG GTTAACAAAG
GTAACAGGCA AAGTTGTTAA CATGGATGAT AGCAATCTTT ACTTAGATGA TGGTTCAGGA
GTTTCAAGAA TATATGTTGA AGGATATATA TGGGATGGAA TAAATGAAAA TATGAAAGGT
AAATGGGATC CAAGAATAAA AGTTGGTGAT ACTGTTTCAG CAATAGGACT TAGCTCAGAA
GACCCAGAGG GCAATAGATT AAGGGTAAGA AATACTGGAG AAATTGTTCT TCAGGAAGAA
GAAAATCTTG GAGTTATAAA CACTGAAATT ACAAGTGATA AAAATGAAAT AAAAGAAAAT
GAAAAAATAA GCTTATTAAC TAAAGTAGAA AATAGCACTA AGGAAGCTTT AGAAAATTTA
ACTTTAAAAA TCTTTGCTAA CAATGGTGAA AATGAAGTTT TATTAAAAGA AGAAAAAATA
GATTCTTTAG GTGTTAATGA ATCTAAGGAA TTAACTTTTG AACATGCTTT TGAATTAGAG
GGTAGATATA GTATAGGAAT AAAGCTTTTT GATTCTGAAG GAAATGAAAT AAAAAGTAAT
AATAAAGAGT TTTCACTAGT TGTTTTAAAA GAAATTAATG GTGGAGATTC TGATAATAAT
GGGGATGCCA ATAATGGTGG AGATTCAAAT AATGGATCAG GAAATGATTC AGGTGAGGAA
AATAAACCAG GCATAGATAA ACCTAATACA GAGAAACCAG AAGAATTACC TAACACTGGT
AATAGAATGA ATGCTAACAT GCTTATGGGC TTTGGAGCTT TATACTTAGC TTTAGGATTT
TATATGGTTT CTAAAAGAAA AAAAGTAAGA TAA
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| Protein sequence | MKKDYKILIT KALSLSMVGS LFTSYPTFAK EFKAQEGDLI ISEYLHGPSN SKAIEIFNGT
GEGINLSNYD LAVYSNGKYE GSPVSQSLED KIIESGETYV IYNNQGKDEK FTEVINDLEN
KLGVGSQTVG FNGDDVILLR KNTGNGYEII DSFGAKTEKD KKFYDSKFIS ARRKSEIKDG
ENNIDKTPFD VSIQWDVDTE NLYDDLGKHD ISWSEGENPS GKVLKVKEAR NKNLGEEVTT
RGVVTFNDRN KTLHIQDETG AIAISNFKSG VDFGAITKGN KIEISGTLDN FNGLLQVQAT
DIKVLGDLGM PDPKLVTIKE LKESNFDSHY IELKNTVVDL EAKTLTQGED VLDIYFIPSG
LEVKTGDLVD VKGVIGRFND KVQLYGSSAE FTKIVEDNES PVITHKKIEK ANINEDLNIE
AKVSDNNKLE EVSISFKGKE DTEFKKVVLK EEDGIFKTLI PKEDLKASGM EYYIKASDGK
NISRVPESGV YAFQVVDEDL SGPEVKNVLP KENSSVGENR KPIISGEFID NSGVNVESVK
IKLDNEDITK VAEITETGFS YEIKEDLEDG EHRVEVSVSD SLGNNRVKEW KFRVGKINHY
YGQLHSHTNI SDGTGSLEDA YKWARDEGKA DYFAVTDHSN WFDNDTEANI NDGSMSKAWT
NAQNISDKYN DDGNFVAMYG YEMTWSGSTG GWGHINTFNT PGFETRKNSD MNLKNYYNTI
SQLPESVSQL NHPGKTFGDF ADFGFYSEGA DKVVNLIEVG NGEGPVRGSG YFPSYEYYTR
ALDKGWHVAP TNNQDNHKGK WLTANDARTI ILSEENSRDA LYKAMNKKQV YSSEDKNTTI
DYTVNNQIMG SNLGEVEDLD FNIEINDEDK EDTIKKVSII ANGGVEVISK EFNSNKVSWN
FKLKPEYSYY YVKVVQGDQD IAVTAPVWIG ENVNVGLNEL KTDKDMLLVG DEAKFSIEVY
NNSSERLNNI KVEFFNGEIS GEKKIGEEII ESLEGNSLKE SSITWQPERA GEFTIYAKAT
ISINGTDKTF TKSSKIEVVN EGDVYKVMID GAHANQYVTG NYAGKIDAFE KLLTENDCIP
IINKEEITEK SLENVDLLVI TDPQGIDEPK YEVYKSNFTA SEIDAIGKYM DKGGNIIITS
RADYKDGVGE YSNGAQLNPI LEKINSELRV NDDQVADYEV NEGQQFRLML NKYSSPNFNL
VEGLGEEDKF SFYSGSSVVL KDGAKGEKVD FLVSGHESTG TDDSDKQGDN VPVEKGQVNV
LAVEELSNGG KVAVAGSTFF SNFEIDGTNA ESKSNSKVTK NIINWMLPEK ELEKLTIKEF
REDKNNDGEP DRLGEEYVLE GIVTAQSEAV EPKNAFFEVI YIQDETGGIN VFGVSNTPVK
VGQKVRVKGR VEAYQGEFEI QISDESADLE IIDENINEVS PKEMSTGDSM LHENEGWLTK
VTGKVVNMDD SNLYLDDGSG VSRIYVEGYI WDGINENMKG KWDPRIKVGD TVSAIGLSSE
DPEGNRLRVR NTGEIVLQEE ENLGVINTEI TSDKNEIKEN EKISLLTKVE NSTKEALENL
TLKIFANNGE NEVLLKEEKI DSLGVNESKE LTFEHAFELE GRYSIGIKLF DSEGNEIKSN
NKEFSLVVLK EINGGDSDNN GDANNGGDSN NGSGNDSGEE NKPGIDKPNT EKPEELPNTG
NRMNANMLMG FGALYLALGF YMVSKRKKVR
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