Gene CPF_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1298 
Symbol 
ID4202149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1471078 
End bp1471833 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content27% 
IMG OID638082179 
Productiron chelate ABC transporter ATP-binding protein 
Protein accessionYP_695744 
Protein GI110800307 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0252271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTAGAAG TTAAAAATTT ATGTTGTGGA TATGATGGTA ATGAGGTTAT ACATAATTTA 
TCTTTTAACA TAAACAGAGG AGAAAACATA TCTATAATAG GACCAAATGG GTGTGGTAAA
TCTACAGTCT TAAAAGCCTT AGCTAATTTA ATAGAATACA AAGGTGAAAT AAAGCTAGAT
GGGGTAGAAA TTAGAAATAT AAAAAGAAAA GATTTAGCTA AAAAAGTTGC ATTGATGAGT
CAAAATTCTG AAGTGTATTT TTCTTATACT GTTTTTGAAA CAGTTTCACT AGGCAGATAT
GCTCATATGG ATGGTATTTT TTCAAGCCTT ACAAAGAAAG ATAGGGATAT AGTCTTAAAG
TGTATTGAAA GCGTAGGATT ATTAAATGAA AAGGATAGGT TAATAAATGA ATTATCAGGA
GGACAACTTC AGAGAGTTTA TTTAGCAAGA GCCTTTGCTC AAGATCCTGA AATATTACTT
TTAGATGAAC CAACAAATCA TTTAGACTTA AAATGTCAAA TTGAAATTTT AGATTATATA
AATAAATGGA CAAAGGAAAA TAACAAAACT GTTATAGGAG TTTTACATGA TTTAAATTTA
GTTCAGATGT TTAGTGAAGA TGCAATTTTA ATAAAAGAAG GTAAAATTTA TAGTAGTGGA
AAAGCAAGAG AATTATTAAA TAGTTCTAAA ATTACAGATG TATATAAAAT AGACATAAGA
AAATTCATGC TAGAAGCATT AGAAAGATGG AAGTAG
 
Protein sequence
MLEVKNLCCG YDGNEVIHNL SFNINRGENI SIIGPNGCGK STVLKALANL IEYKGEIKLD 
GVEIRNIKRK DLAKKVALMS QNSEVYFSYT VFETVSLGRY AHMDGIFSSL TKKDRDIVLK
CIESVGLLNE KDRLINELSG GQLQRVYLAR AFAQDPEILL LDEPTNHLDL KCQIEILDYI
NKWTKENNKT VIGVLHDLNL VQMFSEDAIL IKEGKIYSSG KARELLNSSK ITDVYKIDIR
KFMLEALERW K