Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1082 |
Symbol | |
ID | 4201758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1233775 |
End bp | 1234200 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 638081963 |
Product | MarR family transcriptional regulator |
Protein accession | YP_695528 |
Protein GI | 110800772 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000105511 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAATA ATACTATTTA TACAAACTTA GTTAGCACTA TTGCTAGAAA ATTAAAGTTT TCAGCAGATA AAAAGATTAA TAATTTAGGA TTAAATTCTC AACAAGGTAG AGTTATACAG TATATTTATG AACATCAAGA TGAAGGACTA ATACAAAAGG ACTTAGCAAA TGTATTTGGA AGAACTACAG CAAGTATTAC AAGTATGCTA AAGGGCTTAG AAAAAAACGG ATACATCAGA AGAGAAATCC CCTCTAATAA TGAAAGACAA AAGAACATAT ATGTAGAAAA AAAAGGTATA GATCTTATAG AAACATTCAA TAAGAATTTT CTTGAAATTG AAGAGGATTT AACTTCCTCA CTTACAGAAG AGGAAAAAGA AACTTTTCTA AAAATACTTA CTAAGATTAA TACTAACTTA AAATAA
|
Protein sequence | MNNNTIYTNL VSTIARKLKF SADKKINNLG LNSQQGRVIQ YIYEHQDEGL IQKDLANVFG RTTASITSML KGLEKNGYIR REIPSNNERQ KNIYVEKKGI DLIETFNKNF LEIEEDLTSS LTEEEKETFL KILTKINTNL K
|
| |