Gene CPF_0859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0859 
Symbol 
ID4203371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1018485 
End bp1024772 
Gene Length6288 bp 
Protein Length2095 aa 
Translation table11 
GC content32% 
IMG OID638081742 
Productalpha-N-acetylglucosaminidase family protein 
Protein accessionYP_695309 
Protein GI110800516 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTATG TTTTAGCAAG TACTTTTGTA TTTGGATTAG TTAATCCAAG TGCAATTAAG 
GTAAGGGCAT CAACTGGTGT TGAAATTACG GAAGGGGTTA CTGTAACTGC AAAGGGAAAT
ACTGAGGGCA ATACAGCTGA TTTAGCCATA GATGGTGATT TATCTACCTA TTGGGAATCT
TCAAATGATT ATAAATGGAT AGAAGTTGAC TTAGGTGGAA TTTACGAATT ATCAAAAATT
GAAATATTTA ATAAGGATGA AGCTGTTTAT AAATATAATA TATATGCTTC AGAAGATGGA
GAAAACTTTA ATAAAATAGC ATATAAAAAT AATGATAATG TATCAGACAG TAATGGTAAT
ATGCATACCA TTGATAACGT AAGGGCAGGA AAGATTAGAA TTGATGTAGT CCAAAATAGT
AATAGTGATA GGGTGAATAT AGCTGAAATA AATGTATTTG GTAAAAATAC AGGAGAGAGT
TTACCGGAAG TTAAGAAAAT TGCTACAAGT AATTTTAGTG AAACCCCTTG GGCTACTGAA
TATGAAAAGT TTAATAGTGA TAGTGCCTAT GCCAATGAAA AAACTTTAAA TGAAATAAAG
AATTTAGTTG GTAGAGTAAT AGGAAGAGAA TTTAAAGACA AGTTTATTTT TGAAATAAGA
GATCAATTAA ATGGAAATGA TGTTTTTGAG GTTTCTGATT CAGGAGATGG AAAGGTTTTA
ATAAAGGGGA ATAATGGTGT TTCCTTAGCA TCAGGATTTA ACTATTATTT AAAAAATTAT
TGTAATGTAA GTTACAATCC AATAATGGGG TCTAATTTAA AAATGCCTGA AACAATGCCT
TCTGTTGGGG AGAGAGTAGT TATAGATACT CCATATGAGC ATAGATATGC ATTAAACTTT
TGTACCTATT CTTATACAAT GTCTTTCTGG GATTGGGATC AATATGAAGA ATTCCTAGAT
TGGTGTGCTA TGAATGGGGT TAACTTAGTT TTAGATATAA TTGGACAAGA AGAGGTTTTA
AGAAGAACCT TAAATGAATT TGGATATAGC GATGAAGAGG TTAAAGAATT TATTTCAGGA
CCTGCATATT TTGCTTGGTT CTATATGCAA AATATGACTG GATTTGGAGG TCCACTTCCT
AACGATTGGT TTGAGCAAAG AGCAGAGCTT GGAAGAAAAA TGCATGATAG AATGCAAAGT
TTTGGAATAA ATCCTGTTCT TCAAGGATAC TCAGGTATGG TTCCAAGAGA CTTTAAGGAA
AAAAATCAAG AAGCACAAAC TATTTCTCAA GGGGGATGGT GTGGCTTTGA TAGACCAGAT
ATGCTTAAAA CATATGTAAA TGAAGGGGAG GCAGATTATT TCCAAAAGGT TGCAGATGTT
TTCTATGAAA AGCAAAAAGA AGTGTTTGGA GATGTAACTA ACTTCTATGG AGTAGATCCA
TTCCATGAGG GAGGAAATAC TGGTGATTTA GATAATGGAA AGATATATGA AATAATTCAA
AATAAGATGA TAGAGCATGA TAATGATGCA GTTTGGGTTA TACAAAACTG GCAAGGAAAT
CCTAGTAATA ATAAGTTAGA AGGATTAACT AAAAAAGACC AAGCTATGGT ATTAGATCTT
TTCTCAGAGG TAAGTCCAGA CTGGAATAGA TTAGAGGAAA GAGATTTACC ATGGATTTGG
AATATGCTTC ATAATTTTGG AGGAAGAATG GGAATGGATG CAGCACCAGA AAAACTTGCA
ACAGAAATTC CTAAAGCCTT AGCTAATTCA GAGCATATGG TTGGTATAGG TATTACACCA
GAGGCTATAA ATACAAATCC TTTAGCGTAT GAACTTTTAT TTGACATGGC TTGGACTAGA
GATCAAATAA ACTTTAGAAC ATGGACTGAA GATTATATTG AAAGAAGATA TGGTAAGACT
AATAAAGAGA TTTTAGAGGC TTGGAATATT ATATTAGACA CTGCTTACAA AAAGAGAAAT
GATTATTACC AAGGTGCTGC TGAGTCTATT ATAAATGCAA GACCAGGCTT TGGAATAAAA
AGTGCTTCAA CTTGGGGACA TTCAAAAATA GTTTATGATA AGAGTGAATT TGAAAAAGCT
ATTGAAATAT TTGCAAAGAA CTATGATGAA TTCAAAGATA GTGATGCATT CCTTTATGAC
TTTGCTGATA TATTAAAACA ATTATTAGCT AACTCAGCTC AAGAATATTA TGAGGTTATG
TGTAATGCTT ATAATAATGG AAATGGAGAG AAATTTAAAT TTGTTTCAGG AAAGTTTTTA
GAACTTATAA AGCTTCAAGA GAGAGTATTA TCAACTAGAC CTGAATTCTT AATAGGAAAT
TGGATTGAAG ATGCTAGAAC TATGCTTAAG GACTCTGATG ATTGGACTAA GGACTTATTT
GAATTTAATG CTAGAGCTTT AGTAACAACT TGGGGTTCAA GAAATAATGC TGACGGTGGT
GGGCTTAAAG ATTATTCTAA TAGACAATGG TCAGGATTAA CTGAGGATTA TTATTATGCT
AGATGGGAAA AATGGATAAA TGGATTACAA GCTGAATTAG ATGGAGGAGC TAAAGCCCCT
AATATAGATT GGTTTAAGAT GGAGTATGAC TGGGTAAACA AGAAGAGTGA TACAGATAAG
CTTTATCCTA CAGAAGCTTC TAATGAAAAC TTAGGAGAAC TTGCTAAGAT AGCCATGGAA
AGTTATTCAG TAACTAATAT GGATAAAATA TTAGGTGAAA ATGAATCAGT TGAAAGAGTT
AATATTGCTT TAGGAAAGCC TGTAAGTAGT GAAACTCATG AAGAAACTGA AGCCGATCCT
TTAAGTAACA TTACAGATGG AAATACAGGA ACTATGTGGA TTGCTGATAG GGAGGGATAT
CCTGCAAGTG TAACTGTAGA TTTACAAGGA GTTAAAAGTG TAGATGGAAT AGAATTTGCT
TTTAGAAATC AGGCTGGTGA TAGGGCTGTA GCATACAAAG TAGAGGTTAT GGATGAAAGT
GGACAGTGGA AAATAGTATC AGATAAATCT GAGGATTATT CTAGTAAGGG AGTCATTGAA
AAGGTTGATT TTACTGGAAA GGCTCAAAAA GTTAAGGTTT CATTAACTAA TGTAGATTTA
AACCTAAGTC CATCATATAA AATACCAGAA TTAGCAGAAA TAATGGTATA TGGAGGAAAA
GAAAAGGAAG ATGAGTATAC TAACGTTGCT TTAGGAAAAA CAGTTACTGG AGCAGAGGCT
GAAAATGGAA AATCATTATC TAATATTACA GATGGAGATT TAAATTCTCT TTGGGTTAGT
AATGGTGGAA AAACTCCAGC AACTACATCT ATCGATTTAC AAGGAACAGA AAATGTTGAG
TTCTTAGAGC TTCACTTTGA AAAGCCAGGA CTTAGATTCC AATTTAAAGT AGAAGTAGAA
GATGCAAATG GAAATAAAGA AAATGTATTA GATATGACTT CAAATAAAGA AGATAATGAA
AAATCATATA AAATACCTGT AGGAAAAGAT ATAAATAAAG TTCATGTTAC TATGACAGGA
AAAGCAGAAG GTGGACAACA TCCAGGAGCT TGGGCAGCTA TTGCAGAAGT AAAGGCCATG
TCAAAAGAAA AACCAGCTAA TTATGTAAAT ATAGCAGAAA ATAAAAATGT AAGTGGTTCT
AATTCTCAAA GTGGAAATCC TTTATCTAAT ATTACAGACG GAGATTTAAG TTCCCTTTGG
ATAAGTGATA ATGGAGCTAT GCCAGCTAAT GCCACAATTG ACTTAGAAGG AAATAATTTT
GTAGATTTCT TAGAGCTTCA TTTTGAAAAG GAAGGATTTA GATTCCAATT TAAAGTGGAA
GTTGAAGATG AGAGTGGAAA TAGAGAAACA GTATTGGATA TGACTTCTAA TACAGAGGAT
AATAAAAAGT CATATAATAT TCCTGTAAAA AAAGAAATAA GTAAAATACA TGCTACTATT
ACAGGAAAAG CTCCAGGTGG TTCATTTGAT CAAGCTTGGG CAGCTATTGC AGAAATTAAA
GCTATGAGTA AAGAGGCTAT AAATAAAGTT GAACAAGCTT CCATAGCATT ACCTCAAGGA
AATATGAAAG CTACAGCAAC ATCAGAGCAT CCTGATGTAG GAAATGAAGG CTTAGCTAAG
TTTGCTATTG ATGGAAAGGA AAATACTATA TGGCATACAA AATATAATCC TGTAGAAGAG
TTACCACAAA GTATTACTTT AGAACTTGGA GGGAGTTACG AAATTAATAA GTTTACTTAC
TTACCAAGAA GTGGTGCTAA AAATGGAAAT ATAACTAAAT ATGAGCTTCA TGTAAGTGAG
GATGGAAATA ATTTTAGAAA AATATCTGAA GGAAATTGGG ATGATAGTGG AAGTTTAAAA
ACATTAAAAT TTAATAGTAC AAAGGCAACT CATGTTAAAC TTGTAGCTTT AGAAGGGGTT
GGAGGATTTG CTTCAGCTGC TGAATTAAAT GTATTTGCAA TTCCAGAAAA CCTAGCTATG
AAAGATGAAA CTAAGGTTGA GGTAACTTCA AATAATTCTG AAGCAAATAA TTTAAGAGAT
GGAAATGAAA ATACTCTTTG GGTTCCAGGA CAAGAAGAGG AAAAGTCTGT AACTTTTGAT
TTAAGTAAGG AAAAGGATAT ATCCGCAATA GATATAGTAA GCAAGGGAAA TTCTCCATTA
AAATACTCTA TAGAGATTTC TAATGATGGA ACAGAATGGA CAAAGATAGT TGATGAGAAC
AACAATGAAG AGAATAAAGC TGTATATTCT AATATATTAA AGTCAGGAAA AATAGGAAGA
TTTGTAAGAT TTAATTTTAA TAGTGAGAAT GTTAAAATTG GAGAAATCAA AATTTATAAA
GGAGATTCTA CTTCAAGTTT AGCTTCTTAT ATAAGAGTAG TTGAAGATAT ATATAATAGT
GCAGTAGTTG GGGATATGGC TGGAAACTAT ACTGAAGAGG CTAAGGAATC CCTTGGAAAT
GCTATAAATG AGGCAAAATT AGCTTTAGGA AATGATATAA ATTCAAAAGA GGCTAATGAA
GTTATGAGCA CTTTAAAATC AGCTTTAAAT GAATTCTATA AGGGATTTGT TCAAATAAAC
AGAACTAAAC TTGCAGCTTT AATAAGTGAT GTTGATATTT TACTAAATGA AATATTACCA
AGTCTTATGA ATAGCATGAA CTATAATGAA AAAGCTATAG TAAATGCAGA AATTCAAAAG
CTAAAGTTAG AAAATAATGA GGCTAAAGAA GTTTACAATA AAAAGCAAGT TTCACAAAGT
GAAATAGACA CAGCTTATGA TGAGTTAAAA AATACATTAG ATTCATACTA TGATGCTGTA
AGTGCTGAAA CTGCATATAA ATCAATGGTA CTTTTAGCTA AGGAAAAAGT AGAAAATGCA
GTAGTGGGAA ATGGAAATGG ACAGTATCCT AAGGAAGCTG TAGATGCTTT AAATGAAGCT
ATAAGAATTG CTGAGGAAGG TTTTGAAAGT TCTACAAGCT TAGAAGAGAT TAGAAATATA
ACAAAGACTT TAAAAGAAGC TATAGATACT TTCGTTGAAT CAGTTAATGT AATTGATAAA
GCACAATTAG AAGAGATAAT ATCTTCAATA GAAAGTAAAT TAGAAAATGC AGAAGGAGTA
TATATTCCTA ATGCTATAGA AGAACTTAAA AAAGCTTTAG ATAAAGCTAA GGAGGTATTA
AACAATGAAG GTGCAAATGA AGAGGATATA AATAAGGCTA TCTCTGATTT AACTGAAGCA
GAAGCTAATT TTGAACTTTC AAAAGTTCCT AATAAAGATG AATTAAATTC TGAGATAGAA
AGAGCATATG ATGTTTTAGA AAAACTTAAA GGATTTGAGC ATCTTGAAGG AATAAAAATA
AAGTTAGAAG ATGCTATTTT AGAGGCTGAA AGAGTTAAAA ATGATGAAAA TTCATTAAAA
GTAGATGTGG ATAAAGTTTT AGGTGAATTA AAGATTGTAA TAGAAGAAGC TTTAAAAGCT
ATTGATTCCT CAGAAGTTAT AGTATGCCCA GTAAGAGATT TTAAAGCAAC TAATATTTCA
AAGAAAACTG TAACTGTTCA GTGGAGCGCA CCTGAAAATT CATTTGGATT AGAAGGATAC
GTACTATATA AAGATGGTAA AAAAGTAGCT GAATTAGGAA AAGATGAGAC TACCTATAAG
TTTAAAGGAT TAAATAGACA TACTATATAT AACTTTAAAA TTGCAGCAAA ATATAATAAT
GGAGAGCTTT CTTCAAAAGA ATCCATAACT TTAAGAACTG AAAGATAA
 
Protein sequence
MAYVLASTFV FGLVNPSAIK VRASTGVEIT EGVTVTAKGN TEGNTADLAI DGDLSTYWES 
SNDYKWIEVD LGGIYELSKI EIFNKDEAVY KYNIYASEDG ENFNKIAYKN NDNVSDSNGN
MHTIDNVRAG KIRIDVVQNS NSDRVNIAEI NVFGKNTGES LPEVKKIATS NFSETPWATE
YEKFNSDSAY ANEKTLNEIK NLVGRVIGRE FKDKFIFEIR DQLNGNDVFE VSDSGDGKVL
IKGNNGVSLA SGFNYYLKNY CNVSYNPIMG SNLKMPETMP SVGERVVIDT PYEHRYALNF
CTYSYTMSFW DWDQYEEFLD WCAMNGVNLV LDIIGQEEVL RRTLNEFGYS DEEVKEFISG
PAYFAWFYMQ NMTGFGGPLP NDWFEQRAEL GRKMHDRMQS FGINPVLQGY SGMVPRDFKE
KNQEAQTISQ GGWCGFDRPD MLKTYVNEGE ADYFQKVADV FYEKQKEVFG DVTNFYGVDP
FHEGGNTGDL DNGKIYEIIQ NKMIEHDNDA VWVIQNWQGN PSNNKLEGLT KKDQAMVLDL
FSEVSPDWNR LEERDLPWIW NMLHNFGGRM GMDAAPEKLA TEIPKALANS EHMVGIGITP
EAINTNPLAY ELLFDMAWTR DQINFRTWTE DYIERRYGKT NKEILEAWNI ILDTAYKKRN
DYYQGAAESI INARPGFGIK SASTWGHSKI VYDKSEFEKA IEIFAKNYDE FKDSDAFLYD
FADILKQLLA NSAQEYYEVM CNAYNNGNGE KFKFVSGKFL ELIKLQERVL STRPEFLIGN
WIEDARTMLK DSDDWTKDLF EFNARALVTT WGSRNNADGG GLKDYSNRQW SGLTEDYYYA
RWEKWINGLQ AELDGGAKAP NIDWFKMEYD WVNKKSDTDK LYPTEASNEN LGELAKIAME
SYSVTNMDKI LGENESVERV NIALGKPVSS ETHEETEADP LSNITDGNTG TMWIADREGY
PASVTVDLQG VKSVDGIEFA FRNQAGDRAV AYKVEVMDES GQWKIVSDKS EDYSSKGVIE
KVDFTGKAQK VKVSLTNVDL NLSPSYKIPE LAEIMVYGGK EKEDEYTNVA LGKTVTGAEA
ENGKSLSNIT DGDLNSLWVS NGGKTPATTS IDLQGTENVE FLELHFEKPG LRFQFKVEVE
DANGNKENVL DMTSNKEDNE KSYKIPVGKD INKVHVTMTG KAEGGQHPGA WAAIAEVKAM
SKEKPANYVN IAENKNVSGS NSQSGNPLSN ITDGDLSSLW ISDNGAMPAN ATIDLEGNNF
VDFLELHFEK EGFRFQFKVE VEDESGNRET VLDMTSNTED NKKSYNIPVK KEISKIHATI
TGKAPGGSFD QAWAAIAEIK AMSKEAINKV EQASIALPQG NMKATATSEH PDVGNEGLAK
FAIDGKENTI WHTKYNPVEE LPQSITLELG GSYEINKFTY LPRSGAKNGN ITKYELHVSE
DGNNFRKISE GNWDDSGSLK TLKFNSTKAT HVKLVALEGV GGFASAAELN VFAIPENLAM
KDETKVEVTS NNSEANNLRD GNENTLWVPG QEEEKSVTFD LSKEKDISAI DIVSKGNSPL
KYSIEISNDG TEWTKIVDEN NNEENKAVYS NILKSGKIGR FVRFNFNSEN VKIGEIKIYK
GDSTSSLASY IRVVEDIYNS AVVGDMAGNY TEEAKESLGN AINEAKLALG NDINSKEANE
VMSTLKSALN EFYKGFVQIN RTKLAALISD VDILLNEILP SLMNSMNYNE KAIVNAEIQK
LKLENNEAKE VYNKKQVSQS EIDTAYDELK NTLDSYYDAV SAETAYKSMV LLAKEKVENA
VVGNGNGQYP KEAVDALNEA IRIAEEGFES STSLEEIRNI TKTLKEAIDT FVESVNVIDK
AQLEEIISSI ESKLENAEGV YIPNAIEELK KALDKAKEVL NNEGANEEDI NKAISDLTEA
EANFELSKVP NKDELNSEIE RAYDVLEKLK GFEHLEGIKI KLEDAILEAE RVKNDENSLK
VDVDKVLGEL KIVIEEALKA IDSSEVIVCP VRDFKATNIS KKTVTVQWSA PENSFGLEGY
VLYKDGKKVA ELGKDETTYK FKGLNRHTIY NFKIAAKYNN GELSSKESIT LRTER