Gene CPF_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0398 
Symbol 
ID4202454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp479072 
End bp480091 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content31% 
IMG OID638081282 
ProductPfkB family kinase 
Protein accessionYP_694855 
Protein GI110800090 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAG TTTTAGTATT GGGAGAAATG TTAATGAGGC TAACTCCTCC AAACAACAAT 
AAAATAGGAC AAGCAAATAG CTTTAATGTG TGTTTTGGTG GAGCCGAAGT AAATGTGGCA
GTAGGATTAA GTAATTTAGG AATTGAAACT AGAGTATTAA CAGCTTTACC TGATAATGAA
ATTGGAAACT TTGCGAAATC TTTTTTGAAA TCACAATATG TTGATTGTGA TTTCATAATT
TCAAAAGGGG ATAGGCTTGG ACTATACTAT TATGAGGAAG GATGTTCTGC TAGAAAAGCT
AAGGTTGTTT ATGATAGGAA ACATTCTTCA ATTACTGAGT TACAATATGA AGATATAGAT
GTTGAAAGCT TATTTAAAGA TGTTGAGTTA TTACATATAT CTGGAATAAC TTTTGGTTTA
TCTGAAGAAG TAAGTGAAGT TGCCCTTAAA TTAGTTAATG AGGCTAAAAA AAGAGGTATA
AAGATAAGTG TTGATTTAAA CTATAGATCA AAATTGTTTG AAAGTTATGA GGAGTTTGTT
AGAATAATGA AGCCTGTAGT CCAAGATGCC TATTTATGCT TTGGTTGGTT AAATAGAGAG
GATGAGCCTT TTAAGGTTTT AGATGCATCA ACTACAGAAC TTTCAGATGA GGATTTTATT
GAAAGATTTA GATATACAAT TGAAGATTTA AAAGTTAAAA ATATAGTAAC TACCTTAAGG
TCTGGAACAC CATATAATTA TCATACTTTA CAAGGCGTGT TTTATGATGG GGAAAGAGTA
TATAAATCCT CAAAATATGA TTTTAGTATG ATTTCAAGAA TTGGTGGAGG AGATGCTTTT
GCCGCAGGGG TTATAAGAAC TCTAATTGAA AATAAAGGGG AGGACTTATC CCATGTTATA
GAGTTTGGAA CAGCTGCTGC AGTATTAAAA CAAACTCAGC TTGGAGATGT AAGTATTTCT
TCAAAGGAAG AGGTTTTAGA TCTAATTAAT AATAAGAATT TAGGTAGTGT AAATAGATAA
 
Protein sequence
MKKVLVLGEM LMRLTPPNNN KIGQANSFNV CFGGAEVNVA VGLSNLGIET RVLTALPDNE 
IGNFAKSFLK SQYVDCDFII SKGDRLGLYY YEEGCSARKA KVVYDRKHSS ITELQYEDID
VESLFKDVEL LHISGITFGL SEEVSEVALK LVNEAKKRGI KISVDLNYRS KLFESYEEFV
RIMKPVVQDA YLCFGWLNRE DEPFKVLDAS TTELSDEDFI ERFRYTIEDL KVKNIVTTLR
SGTPYNYHTL QGVFYDGERV YKSSKYDFSM ISRIGGGDAF AAGVIRTLIE NKGEDLSHVI
EFGTAAAVLK QTQLGDVSIS SKEEVLDLIN NKNLGSVNR