Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNK02980 |
Symbol | |
ID | 3254717 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006680 |
Strand | - |
Start bp | 873302 |
End bp | 875448 |
Gene Length | 2147 bp |
Protein Length | 598 aa |
Translation table | |
GC content | 47% |
IMG OID | 638253789 |
Product | hypothetical protein |
Protein accession | XP_567893 |
Protein GI | 58260966 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.157268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAGC AGCTCTTCTT CCTCTCATCA ACAGTTCTCT ATCTCACCAT CCCGGGCACT CCATTCCGTC TTACTTGGTT CAAGAAGACA AAGCAATTTG ATACACCAAC AATGAGCGAA CTCCCTCGAA CAAAGACGAA CGATACCGTC TGCACTCTCA CATCCCCTAT TTCTGGTGCT CCATCACCCG AGAAAACAGC AGTTGATGTA GACGCCATTT GCAAAGAAAA GAAACTTGAC AGCAAATCTA TCGATGAACT ATCACCTCCT TCGACTAACA CTGAAGTACA CCTCGAAGCT CAAACTCAGG AGGAAAGTAG TTTGACCAAG TTAAGTCCAA GCCGCAAGTG GTTCTTACTA CTGGTTTTCA GTGTTGCTCA GGTAGGCACA GTGGTTCGCT GCATTGTATC TATATTTGCT GACAATGCTA CACCTGCAAA GTATCTCGAT GTCTGTTCCG TATCTGCCCT TTTTGTCCTT ACCGATGCGA TTCAAAAAGA CCTTGGCATC CAGTACGAGG CTTCCTCTTG GATCATTGTA AGTTGACCAC ACAGTACTAT CAGTCGGTCT CAAACTGACC ACTTCATCAC AGACTAGCTA CTCCGTCACA TTTGCCTCAT TTTTATTATT CTGGGGACGT GTAGCGGACC TATACTCGGC AAAAGCAGTC TTCGCATACG GCTTCCTTGG ACTCGGTGCT ACCAACTTAG TCATCTCTTT TATGCCTAAT CAGTTTGCCT ATTTCATCTT CCGTGCTTTG AGCGGAATTG CTGGGGCTGC TACTGTAAGT TTCAGTTCCC ATTTAATAAG TAGTGATGGT TGATCAGATA TTGCAGATTC CCTCGGCTTT CAGGTTGATC CTCGCTCTTT TTGAGCCGAA AGAGCTCAAC ATTGCTCTTA CCATTTTCGG TCTCAGCGGT GCCATCGCCA ACGTCACAGG CCTTGTTATT GCTGGCTTCT TTGGATTCAT CACTGCTAAT GACCAACAAG CCGGCTGGAG ATGGTTCTTC CGAGTAGGTC TCAAATCCAT CGACTGGAGA TTTGCTCAAC TGACAATCGT TTCCTTTTTT TCGCAGATGA TGGCTATCGT AATTGTACCT TTCGGCGTTT CCGCCCTTAC TCTCATCCCT CAATCCGCTG GGAAACTGGT TGAACAACTT TCACCCCGAG ATAAGCTCAA AAGGCTCGAC ATTGTCGGCT GCTTCATGAT GCTTGCCTCC ATCATCTTGC TTATACTGGG TATCACTCTC GGTGCTTCTT ATGGCTGGAA AAAACCAGGC TTCTTGGTTC CATTTTTGCT TAGCTGGCCC ATCTTTATTG CTTTCTTTAT CTACGAAGCG AGATTACCTG AGAGCTACGC TTTGATCCCT CCATCATTCT GGAAAATTCC AAACATGACC TTGTTGATTG TCTTTGCGCT CGGTATTTAC CCTTGGTGGT GTGTAAGTCA ATTCTTTGTT GCTACCGATA CGGCTGAGAG CTGATGTCTG GAATGCAGGT GAGCCAACTG CCCCTGATCG AACGATTCAT CGACTACTTC AACGAACCTG CCATCATCGC CGCCCTCCGC GTCTTCCCTC AAGGTGCTTC AGGTCTCTTC GTGGCATTCT TTGTCCCTCG ACTTCTTCAA AAGGTCGGCA GTGCCCGAAT ACCTCTTGCC GGCGGTATGT TCGTCGGTGC TGCCATGTAT CTACTCATTA TTTTCAATGA TGGCAAACTG GGGAGCGATT ATTGGAGATG GCTTTTCCCC GCTTTCATCA TTGGAAGTGG TGCTGCTATG ATAAGCTTCT TATCTACAAA GTATGTTTAT CTCCTTTGAT GGCTTCTTCA TAATCCTTTT CGCAGATGAC TGACTCTAGC ACAGTATCAC AGTTATGACC TCCGTTCCCC CCGAAATTTC TGGTGTTGCG GGTGCGATGC TCCAAGTCTC TCTCCAAGTC GGCGCTGCCA TTAGCCTCAC TGTGCAGGCT GGGCTTCTGA CCCTCAATCC CGGAGGAATG ACCAACTATG CCAATGTGCA AGCATCCTTA TGGTTCCAAT TCGGGTGGCT TGTGCTGAAT GCTTTGATTA TTATTGTTTT CTTTAGACAG AACAAAATGC CAAAGATATC AGAGGAAGAG GGAGCTGGGG CGGCGTTTGG AGCATAA
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Protein sequence | MKEQLFFLSS TVLYLTIPGT PFRLTWFKKT KQFDTPTMSE LPRTKTNDTV CTLTSPISGA PSPEKTAVDV DAICKEKKLD SKSIDELSPP STNTEVHLEA QTQEESSLTK LSPSRKWFLL LVFSVAQYLD VCSVSALFVL TDAIQKDLGI QYEASSWIIT SYSVTFASFL LFWGRVADLY SAKAVFAYGF LGLGATNLVI SFMPNQFAYF IFRALSGIAG AATIPSAFRL ILALFEPKEL NIALTIFGLS GAIANVTGLV IAGFFGFITA NDQQAGWRWF FRMMAIVIVP FGVSALTLIP QSAGKLVEQL SPRDKLKRLD IVGCFMMLAS IILLILGITL GASYGWKKPG FLVPFLLSWP IFIAFFIYEA RLPESYALIP PSFWKIPNMT LLIVFALGIY PWWCVSQLPL IERFIDYFNE PAIIAALRVF PQGASGLFVA FFVPRLLQKV GSARIPLAGG MFVGAAMYLL IIFNDGKLGS DYWRWLFPAF IIGSGAAMIS FLSTNITVMT SVPPEISGVA GAMLQVSLQV GAAISLTVQA GLLTLNPGGM TNYANVQASL WFQFGWLVLN ALIIIVFFRQ NKMPKISEEE GAGAAFGA
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