Gene CNJ02000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNJ02000 
Symbol 
ID3254252 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006679 
Strand
Start bp580274 
End bp581693 
Gene Length1420 bp 
Protein Length175 aa 
Translation table 
GC content45% 
IMG OID638253358 
ProductGTPase, putative 
Protein accessionXP_567373 
Protein GI58259926 
COG category[R] General function prediction only 
COG ID[COG1100] GTPase SAR1 and related small G proteins 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCCTCGTCTT TTCTATTGCC GTTGCTACAG CGCAACATCA AGAACGATAA TCTGCGAGTT 
ATTCTACTAC TTCTGCATAC CGCACAATGT CTCGAACAAC CTCGTTTAAG CTCGTCCTTC
TCGGTCAGTA TCGGCTTTCT CTCGCTTTCG GCTGGTGCTC GAAACTACTC AGAATTACAC
ACTGACGGCC TTGCTGTGGC ACAGGAGAAT CTGCTGTTGG AAAGAGCAGC TTAGTTCTCA
GATTCGTAGG TCATTCTCCG GGCCGTGTAT TCGTTGGACT ATCTTGACTC TCTTCTGCGC
TCTAGGTGCG AAATGAGTTC TCAGACTTCA GGTAAGCTTT TAGATCTTCT CCGTTTTAAA
CTCACTCTGA TTATGCCTGA TCTCTTCAGA GAATCGACTA TCGGTGAGTA TGGCCGGATT
TTCGCTAGTG CGAACATATC TGCAGGAACC TTTATACTGA CGCCCAGTCC CTTTGCCCCA
TTATATCCTA TCAGGCGGTA AGTTGTCGTG GGTCAGTCAT CATGCGATAG TAAACTCACC
TTTCTATATG TTCACAGCTG CATTTCTTAC TCAATCAGTA AAGCTTAGCG AGTCTACATC
TATCAAATTC GAGATATGGG ATACGGTAAG TGTCCTTTTA GACGAACTGT CTATGCGTAC
CAGTGATGAC TTACAACGTT ACAGGCAGGA CAAGAACGTA CGTGGTAGCA ATTAGCTAAT
ACTCGTCATT AATTAACGGG AGTATAGGCT ACAAATCGCT GGCTCCCATC TACTTTAGAA
ACTCAAACGC CGCTGTAATT GTTTACGACA TTACCCAAGT CAGTGACGTA CTGCCATTTT
TATCTTTGCG TCTTATACTA ATATCCTTAT TCTCCTACGT AGCCGCCTGA GGTATGTTAC
AGGCTATTAT GTGTCCGTTT TTCCCTTGTT GATCATGTTA ACTCGTTTGT AGACATCCTT
TGAAAAGGCC AAGTCTTGGG TGCGGGAACT CCAACGTCAG GCTGACCCGT CAATCGTGAT
TATGCTTGTC GGAAACAAGA CAGATATGGA ATCTCAGCGG AAAACTTCTC GTGAGATTGG
TGAACAGTAT GCCAAAGAAG AAGGATTGCT GTTTGCAGAA GCTAGTGCAA AGACCGGGGA
AGGAGTCGAG GAACTTTTTA TGGAGATCGG TTCGTCATTC ATTTCTTCAC ACTGACATCA
AGCACTAAAC CTATCCTCTT GCAGCTAAAA AGCTTCCTCT TGCCCCACCG CCGCCGAGAG
GGCAAGTTGC TGGTGGTAAA GGTGTTCAAG TATCCGGACA GGAAGACTCT GCCACTCCTT
CAGCTTGTAC ATGTTAAATT TCGTGCACGA CGTGCCTTAT AGAGTGCTTT TTCTTTACGT
ATCAGGCTTT GAGCAGTAAT ACATATTTGT GTTGATATTT
 
Protein sequence
MSSQTSENRL SVTAFLTQSV KLSESTSIKF EIWDTAGQER YKSLAPIYFR NSNAAVIVYD 
ITQVSDTSFE KAKSWVRELQ RQADPSIVIM LVGNKTDMES QRKTSREIGE QYAKEEGLLF
AEASAKTGEG VEELFMEIAK KLPLAPPPPR GQVAGGKGVQ VSGQEDSATP SACTC