Gene CNJ00090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNJ00090 
Symbol 
ID3254154 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006679 
Strand
Start bp19846 
End bp20752 
Gene Length907 bp 
Protein Length196 aa 
Translation table 
GC content45% 
IMG OID638253166 
Productu3 small nucleolar ribonucleoprotein protein imp3, putative 
Protein accessionXP_567267 
Protein GI58259709 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0522] Ribosomal protein S4 and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACAGC TTAAGCATCA TGAAAAGAAA CTCCTCAAAA AAGTTGATTT TCTCAGTGTA 
CGTAGCTACT TTACAAGTCT AACCTCCGGA TCCGAATTCA CTCAAAAGGC TTGAAAAGAA
TCGAAGACTG ACAGACGACC GTTGCACAGT GGAAACAGGA TGCTTCTCAG CGGGAAGTCA
AGGTGATGCG CAAGTATCAC ATCCAAGATC GAGAGGACTA TCACAAGTGA ATCGAATTCA
CTTATCGAAA GCAGGGTCAG TTCGAGTCTC CCATGCTGAT TCCCATCTCG TAGATACAAC
AAGTTGTGCG GTTCATTACG ATCATTAATC CATAAACTCT CACTTCTCCC GGCGAACGAC
CCATTCCGAC AACAAAAGGA GGCTGAAATG CTTGACAAGT TGTATGATAT GGGTATCCTC
GGTACGTCAC CAACTCTCGA AATCCACTTG CGAAAGTCAA GTCGAAACTA ATTTCTTTTC
CAGACATCGG CTCCAAACCC TCTGACATTG AAAACAAAGT AACGGTCTCC TCCATTGCCC
GGCGCCGTCT TGCCGTCGTC GTTGCCCGTC TCAAAATGTC CGAAACCGTC TCTGACGCGG
TACGCACTAT CGAGCAAGGT CATATCCGAG TAGGACCCAC ACCAGTGACT GATCCTGCTA
TGCTTGTCAC GAGGAGAACG GAGGACTTTG TTACTTGGGT TGACACAAGT GCTAGGAAGA
GGACTATTAT GAAGTATAAT GACGAGGTGA GTGTTATCTT TGAACCTTGT GGTTCCTTCC
TCTCAGTTAA GCACCAGGAG AGCGATGACT GATTGTAATG TCATCTTAGC TCGACGACTT
CGACCTGTTG TAAAAAAAGC ATTCCTTAGT AACATTTACC TGTACACTAT ACAGATTATA
CATTATG
 
Protein sequence
MRQLKHHEKK LLKKVDFLSW KQDASQREVK VMRKYHIQDR EDYHKYNKLC GSLRSLIHKL 
SLLPANDPFR QQKEAEMLDK LYDMGILDIG SKPSDIENKV TVSSIARRRL AVVVARLKMS
ETVSDAVRTI EQGHIRVGPT PVTDPAMLVT RRTEDFVTWV DTSARKRTIM KYNDEVSVIF
EPCGSFLSVK HQESDD