| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNI02710 |
|---|
| Symbol | |
|---|
| ID | 3259768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006694 |
|---|
| Strand | - |
|---|
| Start bp | 727833 |
|---|
| End bp | 732805 |
|---|
| Gene Length | 4973 bp |
|---|
| Protein Length | 1185 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638258762 |
|---|
| Product | translation repressor, putative |
|---|
| Protein accession | XP_572682 |
|---|
| Protein GI | 58271052 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4581] Superfamily II RNA helicase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.708185 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CAGGCTATAT CCATATCCTT CCGCCTTTTT TTGGTATAAC CATCAAGACC GGGGAGAAAG
AATGGAGCAG ACGACCGATA TCGAGGATTC GGTCTTTCTA GAGCTCCTGA ATACTGCCGC
CAATCCTACT TCGGTCGATG CGATACCATC GGACGAGCTT GCCACATCAT TAGGAATTGA
TGGTCCTTTG AGCAGAGAGC AAGCCTTGGA ACTATTGGAA AATGAAGTTT TATCTCCTGT
GCACAAATTC CAAGGACATG AACTTGGGCA ATGGCAAGTG TAAGTAGCCC GTTGGCATCT
CATTCAATAA ATGTTGCATT CAATTGACAG TCATTGGTAG GCAACCACCC ATCAGCCTTC
CTATACCGCC ATTGACCCTT TCTCCTCTGC ATCAGACACA CACGGTAACT CCGTCGTTCC
GAGGTATTAA TGGGGAATTC ACGCATTGGC GGGAAGCTCT TGCTCCTAAA CCCCCAGCCC
ATCCCACTTT GTCTTCATCT ACGACCCGAG CCCCTGGTTC TATGCAGAAT TTTGTCAGAG
GGAAGGGGTC GTATGCTCCT TTCCTTCCTG GTGGTCTGGA GGCTGCTGCT AAAGTGGAAG
AGGATGAGGA CGAAGATGAA GATGAAGAAG TAGGATGGAA AACAAGGGCA CCGGGAATGA
AAAAAGGTGC CAAGCTCGAT GGAGGTCAGA TAATCCCTCT CAAGACAAAA TGCTGCTGCT
GACGCTTTTG AAGCGGATAA ATTCCTCGCT GAAATGCTCG GTCAGCAATC ATTAACTGCA
AAGGCCAAGA GGCGTCGACG GGATGGCGAG TTTGCTTCAC CTCAGTTGAC TGTCTCAAGG
CTAGGTGACA AGGATGAAGA TGTTGACGGG ATCGATCTCA AGCCCGTTCA GTCCTCAGAT
AAGAACATCG ATGATTTGTT GCCAATAGGA GTGGGTATCC ACATTCGACT TAAAGCACAA
ACCCTGATAT ATTCCTTTAG CGTCTTCCTG CTCCTCCATC TTCGAAGAAG CAGTTTAAGG
CCGTTGCAAA GAAGGAGTGG GCCCATGTTG TGGATGTCAA TCAAAAATTG GAGAACGTAA
GCTACAGCTG TTATTGCATT AGCTAATTAT CATAAGTTCA ATGAACTGGT ACCTGAAATG
GCAAAAGATG TGAGCTTTTT GCCGCTCGTG ATCCGAAGTC TTGTATCTGA CATACATCTA
GTATCCTTTC GAACTTGATA ACTTCCAAAA AGAAGCTGTT TACAGACTGG AAATGGGAGA
TAGTGTTTTC GTTGCTGCCC ACACGTCTGC CGGTAAAACA GTTGTTGCTG AATATGCTAT
CGCCCTTGCA GCGAAACATA TGACCAAGTG GGTCTATCAA TAACGCCCTC CTTCGTTACT
ATAATTAACC CTCATCATCA GGACCATTTA TACTTCTCCC ATCAAAGCTC TTTCGAATCA
AAAGTTCCGT GACTTCAAAA CCACGTTTGA GCCCTCAACT GTTGGTATCC TGACGGGTGA
TGTCCAAATC AATGCCGAAG GAAGCTGTCT GATTGTGCGT GAATTCGAAT GTCGCTCGAG
TTTTTTAACA TTATGTCTTG CAGATGACGA CGGAAATCTT GCGAAGCATG TTGTACAAGG
GTGCCGACCT TATCCGAGAT GTTGAGTTCG TCGTCTTCGA TGAAGTCCAC TACGTCAATG
ATGCCGAGGT GTGTATAATT TTCTTTTATC GGCATACTTC TGTTTGACAA AATTTCAGCG
AGGTGTGGTT TGGGAAGAGG TTATCATCAT GTTACCAGAA CACGTTAACA TCATTTTGCT
ATCTGCTACT GTACCAAACA CGAAGGAGTT TGCAGATTGG GTTGGGTGAG TATCGCAGCT
TGGTCCTTTT CCAGTCGTTA ACAACATGTA GGCGAACCAA GAAAAAAGAC ATCTATGTCA
TCTCTACTCC TATGCGACCC GTCCCTCTCG AACACTTTCT CTGGGCCGGT CGAGAAACCC
ACAAAATTGT CAGCTCACAA TCCAAGTTTC TTATGGAAGG ATACTCCTCA GCTAGCGATG
CTCTCCGGCG CAAACAGGAT AAGGAACGAG AAGCCAATGG CTTGCCACCT GTACAACGTA
CCGGTGGTCG AGGAGGAGCA GCAATTAGGG CGAAAGATCT TCCAACCGGA AAGAGCGCGC
CCTTTACACG CATTGGAGCT GGCAGAAACC ATACGAATCG CGGAGGTGGT AATGGCCCAC
CACAAGCTGC TTTCGGAGGT GGACGAGGCG GACGTGGAGG TGGTCGAGGC GGGTTTGGAG
GTAGTTCGCG TCCTTCTCAC GTGCTCGATC AAAACATCTG GACTCATCTC ATCAGCTATC
TCAAGAAGAA CATGCTCTTA CCGGTCGTCA ACTTTGTGTT TAGTAAGAAG AGATGTGAGG
AGTATGCGCA AACCTTAAGC CTAGATCTTT GTACCGCGAA GGAGAAGAGT GAAGTACATA
TCACTTGGGA GAGGGCGTTG ACGCGGCTGA AGGGTATGTC CTCTGTTCCT ATCGATCAAC
GCTGACTTTT GTATGCAGGC GAGGATAAAA CTCTTCCTCA GATTTTGCGT ATGAGGGAGC
TATTGAGCCG AGGTATCGGT GTTCATCATG GTGGTCTTTT GCCATTGGTC AAAGGTACGT
GTATCTTTTC TTACCAACCG ACTGCTTTAT GATGCTGATT GATGTTGCAG AGGTCGTCGA
AATTTTGTTC GCTCGAGGTC TCGTGAAGGT CCTTTTTGCC ACTGAAACCT TTGCCATGGT
GAGGTTATTT CTTTCTTCCC TAAAGGCATT GCTCATTTTT CCGTCAGGGT GTCAATATGC
CTGCGAAATC GGTCGTGTTC TCTGGCATTC GGAAGCACGA CGGTACCTCT TTCCGCAACC
TCCTTCCTGG AGAGTACACT CAAATGGCTG GTCGAGCCGG TCGTCGTGGT CTCGATACCA
CGGGAACAGT CATTATTCTC AGCGGCGATG AGCTTCCCAG TGTCGAGGAG TTGAACGAGA
TGATGCTTGG TGTACCAAAC AGGCTCTCAT CGCAATTCAG ATTGACTTAC AACATGATCT
TGAATTTGCT GAGAGTAGAA GCGCTCAAGG TGGAGGAAAT GATTAAAAGA AGTTTCTCAG
AGAATGCGAC CCAGAAGATG GCGCCAGAGC AGCAGAGGGT CATCGCACAA GTGAGCACTC
TTCTTTCCAT GTGATTTGAG AGGCGTTGAT TAACTGCTGC GAGCAGACAG AGAAAGAACT
TGCCAAGCTT CCCAAGCTTG AGTGCGATGT TTGCAGTGCC GATATCGATG CTTTCTATAA
TCTCTCAACT GAAGCTTCAC GACTCAATGC CCAGTTCCTC AAGAGAGCCT CGTGGTCTAA
CCAATCTGGG AAGTTGTTTG TCCCAGGCAG AGTGATAGTG TTGCGCAATG CTGTGGGCAC
ATCTCTTTCA ATCAAAGCAC TTTTTCAAGC TTATTAGTTG TTTGCAGCAT TTCCCTGGCA
ATCTGGCTGT AATCTTAGGT AATCATCCTA ACCTTGGGCC TGATGGTCAA CGGTCCGATG
TAAAGGCGTT CAGAGTCCTT GTACTTGTAA CGCCGGGGCA GAAGTCCGGC AAAGGAGGTG
AGCTTAGTGA ATTGTGGCTT CTACTAATAT TTGCTAGATC TTTCAGTAGA GGAGTTGACT
CCTCGTTGGC CGCCTATCCT CCCGAAAGGA TCGTTCCCCA GTCCTACTGC TGAACGGACA
GTGGTTGACA CGTCCTCTAT TTCCTTCGTG ATTAATCATA TCTTGAAGGC AAGTAGTATC
GAAACCCAGC ATCATCGTTA TAATAACTCG ACTAATTCAA TAATCGCAGT ATGACTTCCA
CCGCTTGAAT AGTAGAGAGT CCCCTTCCGA TGTTCAGCGA GCTTTAGACG ATCTCACCAA
ACTTCATGAA GAGCTTTCGC TCTTGCCTGA ACTGCCTGAA GCCGACTGGT CAAGGTTGAG
AGATATCGAT ATCCAGTCGT TACTTAAGGA AAGAACAAAC GCTGCCGGCA GGCTATCAAA
GTTGGGCTGC CAGTTGTGCG AGGACTTTGC GGATCACGTG AGCTCTTGTT TCATCTAACT
GCCGACTACG AATTGACCGT TTGGTATCAG TATGCCACTG TACATGAGCG AAAGCAGGTG
GAACAGCGTA TCCAAAAACT CAAACTCCAA CTCTCCGATC AAAATCTTGA GTTGCTTCCT
GACTATGAGT CTCGGGTCGA AGTCCTCAAA CGACTCTCTT TTATTGACGA AAACGCCACC
GTTCTTCTCA AGGGTCGCGT GGCTTGTGAA ATTAACTCTG CACCAGAACT CATTCTTACG
GAACTCATCC TTGAGAATAT TCTGGCGGAC TACACACCTG AAGAGGTTGT TGCCCTTCTT
TCAATCTTCG TGTTTGTGGA AAAGACAGAG TCTCAACCCA TAATCCCAAC CAAGTTACAG
GACGGTCTGG ACGTCATTTA CAACATTGCA GAGCAGGTAG AAAGGGAACA GGACTACTGT
CAAGTTCAAC ACGATGAGTT TGCCACCAAG TATAAACCTG GTCTGGTGGA AGTCGTTTAT
GAATGGGCAA GAGGAATGGT GGGTACCCTT CTGGTGGGCT TATAATCACT TATTAACTGA
ATAATGAATC AGCCTTTCAA CGAGATCACT AATCTGACTG ATGTACCGGA AGGAACGATC
GTGCGAGTAA TCACAAGGCT GGATGAGACT TGTAGAGAAG TCAGAGATGC GGCAAGAGTC
ATCGGCGATG CCGATCTGTT TAAGAAGATG GAGGAAGCGC AGGGTTTGAT TCGAAGAGAC
AGTGAGTCAT TCCGTTTGAG GCGTTGAACA CACCTGATGG TCTCTTCCAC AGTTGTTTTT
GCTGCAAGTT TGGTAAGTTT CAACCCACAG TGACACCAGA GTAAGACACC TGACCAATCT
CTAGTATCTC TAACTGCATC TATATTCATA CCATCATTGT AGTATGCAAG CAA
|
|---|
| Protein sequence | MEQTTDIEDS VFLELLNTAA NPTSVDAIPS DELATSLGID GPLSREQALE LLENEVLSPV
HKFQGHELGQ WQVQPPISLP IPPLTLSPLH QTHTVTPSFR GINGEFTHWR EALAPKPPAH
PTLSSSTTRA PGSMQNFVRG KGSYAPFLPG GLEAAAKVEE DEDEDEDEEV GWKTRAPGMK
KGAKLDGADK FLAEMLGQQS LTAKAKRRRR DGEFASPQLT VSRLGDKDED VDGIDLKPVQ
SSDKNIDDLL PIGRLPAPPS SKKQFKAVAK KEWAHVVDVN QKLENFNELV PEMAKDYPFE
LDNFQKEAVY RLEMGDSVFV AAHTSAGKTV VAEYAIALAA KHMTKTIYTS PIKALSNQKF
RDFKTTFEPS TVGILTGDVQ INAEGSCLIM TTEILRSMLY KGADLIRDVE FVVFDEVHYV
NDAERGVVWE EVIIMLPEHV NIILLSATVP NTKEFADWVG RTKKKDIYVI STPMRPVPLE
HFLWAGRETH KIVSSQSKFL MEGYSSASDA LRRKQDKERE ANGLPPVQRT GGRGGAAIRA
KDLPTGKSAP FTRIGAGRNH TNRGGGNGPP QAAFGGGRGG RGGGRGGFGG SSRPSHVLDQ
NIWTHLISYL KKNMLLPVVN FVFSKKRCEE YAQTLSLDLC TAKEKSEVHI TWERALTRLK
GEDKTLPQIL RMRELLSRGI GVHHGGLLPL VKEVVEILFA RGLVKVLFAT ETFAMGVNMP
AKSVVFSGIR KHDGTSFRNL LPGEYTQMAG RAGRRGLDTT GTVIILSGDE LPSVEELNEM
MLGVPNRLSS QFRLTYNMIL NLLRVEALKV EEMIKRSFSE NATQKMAPEQ QRVIAQRKNL
PSFPSLSNHP NLGPDGQRSD VKAFRVLVLV TPGQKSGKGV VDTSSISFYD FHRLNSRESP
SDVQRALDDL TKLHEELSLL PELPEADWSR LRDIDIQSLL KERTNAAGRL SKLGCQLCED
FADHYATVHE RKQVEQRIQK LKLQLSDQNL ELLPDYESRV EVLKRLSFID ENATVLLKGR
VACEINSAPE LILTELILEN ILADYTPEEV VALLSIFVFV EKTESQPIIP TKLQDGLDVI
YNIAEQVERE QDYCQVQHDE FATKYKPGLV EVVYEWARGM PFNEITNLTD VPEGTIVRVI
TRLDETCREV RDAARVIGDA DLFKKMEEAQ GLIRRDIVFA ASLYL
|
|---|
| |