Gene CNF00180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNF00180 
Symbol 
ID3258071 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006691 
Strand
Start bp56386 
End bp57594 
Gene Length1209 bp 
Protein Length340 aa 
Translation table 
GC content51% 
IMG OID638257139 
Productconserved hypothetical protein 
Protein accessionXP_571288 
Protein GI58268264 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3509] Poly(3-hydroxybutyrate) depolymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAGCTC TCGGAGTACT AGTGTTGGCC CTCCATATCT TCGGCGGTGC CTTCGCAGCG 
CCTTCCAAAC TCGTCCTCGA TACGCCTTTC CAAAATGATC AAATCAAGTT TGGCGTGTTC
TCTGAGCCTA CCACCGTTGA CAAACCCCTG ACCGGTAATA TCGCCTATGA ACTACGAGAG
ACCGAACGAA CATTCTTGCT GAACGTACCC GAGAACTATG TTCATGGGAA GGCCCACCCC
CTTGTGTTCA GCTTCCATGG CGGTAAGCCC TTATTCTCTA TTATTCCATC GGAGGAGGAG
AAAGCCATAC ACAATTATGA AATCGGGCTG ATGATATGGC AATTCACAGC TGGCGGTTAC
AGCGAGAAAC AACAACGTAT CACAGAGCTC TCAGATCCCA GTCTTAAGAT TGCGGGCAAG
TCTTTCTTGA CCGTCTATGC ACAAGGTGTG AACAATACGG ATTGGAATAT GACTCACATC
TGGAAAGGGG CACCATACGA AAACACCACA GTAGACGATG TGAGCTGAAT CTCTCCCCTC
CCTAACCTAC CCATTCCATC CGGACGTCAA TAAACTATTT ACATGGGAAC ATTTTTAGAG
CTGACGGATA TTTGATAGAT CGCATACGTC TACGATATTC TCCGCACCGT ATCCTCCTCA
TACACAATCG ACAAATCTCG TCTCTACGCA TGCGGTAAAT CCAACGGCGG GGGATTCACC
GCCCTCCTCG CCTGTCGACC CGACACATCC GCTCTTTTCG CAGCTTTCGC TCCCGTCTCC
CCAGCCTTGT ATCAAGGAAC CTTCGCCTTC CACGGCTGTC AAACCGAGAG GGGGGTTAAC
ATTTTCCACA GCCATGGCGT TGAAGATACC GATACGCAAT ATCACGGTCG AACACCCGAG
GGCGGTAGTT TTGGGCCGGA GCCGGATGTG AGGCAATGGA GGAGGGAGTG GGCAGAGAGA
AATGGGTGTA AAGGTCGTTG GCCTGGGCAG TGGGCGGAGC CAAAGGTGGA AGAGATATAT
CCTGGCGTTT GGGAAGAGGT TTGGGATTGT CCAAAAGGTG AAGTGAAGGC GTTGAGTATT
GAGAAGCTGG GGCATGCCTG GCCTTCGACG GCAGGTTGGG ATCTGGCGGG GTTCCCCAAC
CAAACTGCCA ACTTTAACTT TACTAATCCT CACCTTGTTG ACTTCTTTTC GGAACATCAG
TTGGTCTAA
 
Protein sequence
MLALGVLVLA LHIFGGAFAA PSKLVLDTPF QNDQIKFGVF SEPTTVDKPL TGNIAYELRE 
TERTFLLNVP ENYVHGKAHP LVFSFHGAGG YSEKQQRITE LSDPSLKIAG KSFLTVYAQG
VNNTDWNMTH IWKGAPYENT TVDDIAYVYD ILRTVSSSYT IDKSRLYACG KSNGGGFTAL
LACRPDTSAL FAAFAPVSPA LYQGTFAFHG CQTERGVNIF HSHGVEDTDT QYHGRTPEGG
SFGPEPDVRQ WRREWAERNG CKGRWPGQWA EPKVEEIYPG VWEEVWDCPK GEVKALSIEK
LGHAWPSTAG WDLAGFPNQT ANFNFTNPHL VDFFSEHQLV