Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNF00180 |
Symbol | |
ID | 3258071 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006691 |
Strand | + |
Start bp | 56386 |
End bp | 57594 |
Gene Length | 1209 bp |
Protein Length | 340 aa |
Translation table | |
GC content | 51% |
IMG OID | 638257139 |
Product | conserved hypothetical protein |
Protein accession | XP_571288 |
Protein GI | 58268264 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAGCTC TCGGAGTACT AGTGTTGGCC CTCCATATCT TCGGCGGTGC CTTCGCAGCG CCTTCCAAAC TCGTCCTCGA TACGCCTTTC CAAAATGATC AAATCAAGTT TGGCGTGTTC TCTGAGCCTA CCACCGTTGA CAAACCCCTG ACCGGTAATA TCGCCTATGA ACTACGAGAG ACCGAACGAA CATTCTTGCT GAACGTACCC GAGAACTATG TTCATGGGAA GGCCCACCCC CTTGTGTTCA GCTTCCATGG CGGTAAGCCC TTATTCTCTA TTATTCCATC GGAGGAGGAG AAAGCCATAC ACAATTATGA AATCGGGCTG ATGATATGGC AATTCACAGC TGGCGGTTAC AGCGAGAAAC AACAACGTAT CACAGAGCTC TCAGATCCCA GTCTTAAGAT TGCGGGCAAG TCTTTCTTGA CCGTCTATGC ACAAGGTGTG AACAATACGG ATTGGAATAT GACTCACATC TGGAAAGGGG CACCATACGA AAACACCACA GTAGACGATG TGAGCTGAAT CTCTCCCCTC CCTAACCTAC CCATTCCATC CGGACGTCAA TAAACTATTT ACATGGGAAC ATTTTTAGAG CTGACGGATA TTTGATAGAT CGCATACGTC TACGATATTC TCCGCACCGT ATCCTCCTCA TACACAATCG ACAAATCTCG TCTCTACGCA TGCGGTAAAT CCAACGGCGG GGGATTCACC GCCCTCCTCG CCTGTCGACC CGACACATCC GCTCTTTTCG CAGCTTTCGC TCCCGTCTCC CCAGCCTTGT ATCAAGGAAC CTTCGCCTTC CACGGCTGTC AAACCGAGAG GGGGGTTAAC ATTTTCCACA GCCATGGCGT TGAAGATACC GATACGCAAT ATCACGGTCG AACACCCGAG GGCGGTAGTT TTGGGCCGGA GCCGGATGTG AGGCAATGGA GGAGGGAGTG GGCAGAGAGA AATGGGTGTA AAGGTCGTTG GCCTGGGCAG TGGGCGGAGC CAAAGGTGGA AGAGATATAT CCTGGCGTTT GGGAAGAGGT TTGGGATTGT CCAAAAGGTG AAGTGAAGGC GTTGAGTATT GAGAAGCTGG GGCATGCCTG GCCTTCGACG GCAGGTTGGG ATCTGGCGGG GTTCCCCAAC CAAACTGCCA ACTTTAACTT TACTAATCCT CACCTTGTTG ACTTCTTTTC GGAACATCAG TTGGTCTAA
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Protein sequence | MLALGVLVLA LHIFGGAFAA PSKLVLDTPF QNDQIKFGVF SEPTTVDKPL TGNIAYELRE TERTFLLNVP ENYVHGKAHP LVFSFHGAGG YSEKQQRITE LSDPSLKIAG KSFLTVYAQG VNNTDWNMTH IWKGAPYENT TVDDIAYVYD ILRTVSSSYT IDKSRLYACG KSNGGGFTAL LACRPDTSAL FAAFAPVSPA LYQGTFAFHG CQTERGVNIF HSHGVEDTDT QYHGRTPEGG SFGPEPDVRQ WRREWAERNG CKGRWPGQWA EPKVEEIYPG VWEEVWDCPK GEVKALSIEK LGHAWPSTAG WDLAGFPNQT ANFNFTNPHL VDFFSEHQLV
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