Gene CND03580 details

Gene Information

• Locus tag: CND03580
• ID: 3257267
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006686
• Strand: +
• Start bp: 981983
• End bp: 984230
• Gene Length: 2248 bp
• Protein Length: 410 aa
• GC content: 47%
• IMG OID: 638256291
• Product: chitin deacetylase, putative
• Protein accession: XP_570200
• Protein GI: 58266088
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0726] Predicted xylanase/chitin deacetylase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.322784
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CACTCCTTCT TCATCAGCGC TGCCTCTCCA TCTTCCCACC TCCCCTACTG CCTATATCAC 
GATCCTCTTC CCTCATTCTT CGCCTCCTCT TCTCCCTTTC TCTCCTATCT TTCCTTGGGT 
ACGTCTGTTT ACTCATCCTT CAGTCGATCA ATCAAACGGT TTACTGTTGT GTATCTGTGA 
TCCTTTCTGC CTTCATCAGA TCAGTTGGTG TCTAACCGTG TGCACACAGT CGTTCTGTAC 
AAGGAGTCTC TCTCCCTTCC TGCCTTTCGG CATAACGACG GCCTCTTGCG CACCCACGCA 
ACCACATGTA AGCACATCCT CTCCTTTCGT CTACAAATGG GGAAACTATT ACGTATACAA 
TCGGACTAGG ACTGACCCCA CCTATCCAAT CAGAACAGCC CGTTAGAATG TACGGTCATT 
TATCTCTCTC CACACTTTCC TTGCTTGCAG TGGTGGCCGC TGCTCCATTC CCCGAGTCAT 
GGCTTCAGCC TAGAGACTCC GACGTCTCAC AACTGTTCAG ACGAGGTGCT CCCGATCCCA 
AGGCCAGTGG TCAGTACCAC CTTCTACTAT CTTCCAATAA GTGGGACGAG ATTTCACTCA 
TATTTCTTTA TAGATTACTT GAGTTACTAT CCAAGCCCTG GGTCCACTCC GAACGTCAGC 
ACCATTCCTC AAGCTTGGTT GGATAAACTG GCCACTGTGC AGTTGCCAAA TGTCTCGGTA 
GCTACAGCTA ATGACGGTCG TCCTACTTAC CCTAATAATG AGAACGATGG AGATTCAGAA 
ATTTGTTCTT TCACCGATCA ATGTTACGTA GAGGACGATC TGTACTCTCC CCCCGGTGAA 
AAGGTCTGGG CCGTGAGTGT TATGTGCTTC TCCCATCGTC TTCATCCAGA GAATGTTCTT 
GACGCGGGTG TACAGCTCTC CTTCGACGAT GGACCAACAG ACGTCAGTCC TGCTCTCTAC 
GACTATCTGG CTCAGAACAA CATATCTTCC TCTGCGACTC ATTTCATGAT CGGCGGTAAT 
ATTATTACTT CGTACGTCTC AATCTGCAGC ATGTACCTGC AAGTGCTATA ATATTGACTA 
CTTGAAATGT AATAGCCCAC AGTCAGTTCT CATTGCCATT GAAGCTGGAG GTCACCTCGC 
TGTCCACACT TGGTCCCATC CTTATAGTAA GTATTTGTCA AATCAATGCA CGATTAGTTT 
TTAAGTCATT TCGTGCAGTG ACAACTCTCA CCAACGAGCA AGTCGTTGCA GAACTCGGCT 
GGACCATGCA AGCCCTTAGC GATCTCAATG GTGGCCGAAT TCCCATGTAC TGGCGTCCAC 
CTTATGGTGA CGTTGACAAC CGTGTTCGAG CTATTGCGAA GGGAGTATTT GGCTTGGTGA 
CTGTCCTTTG GGATTCGGGT GAGCATCTCG TTTCATGCTG TGGACAAATT GCTAACGGGT 
TATAGACACC AATGACTGGG CTATTTCCGA CCAGCCAGAC CAATACTCTG TTGCAAGCGT 
TGAGGCTTAT TTCGACACTT TGGTCACTGG CAATCGAACC CAAGGTCTTT TGCTCTTAGA 
ACATGAGTTG GATAACAACA CTGTCGAAGT CTTCGAGACG GAGTACCCCA AGGCAGTAGC 
TAATGGATGG TCTGTCAAGA ATGTGGCAGA TGCTTTCAGC ATGAAGTGGT ACCTGAACTC 
TGGCAAGGGC AACGACGACG TTGTCACAAC TATGTCTGTT GCCGGGACTC TGACCACGGC 
CAAACCAACT CATACATCCA CCTCTGTCGC TTCCGCGACT GCAACCTCCA GTGCTTCTGT 
CACGGACTCG GCTGGTGTGT CAATCGCCTC TGCTGCCAGC TCCCAAGAGT CTTCTTCGTG 
GCCCATTGCC AACAGGCCTT CTCTCTTCGT CATCGCGTGC GGCCTTGCCC TTGCTGCTAT 
TATGGTCTGA TAAAGGCTAG GTTCAGTTTT TTTTTGTCGA TCTTTTAGAT CATGGACTTT 
CATTCGCATT ATGTAGGAAT CGTGAACATA TAATTCATTT TTGATTGCCA TAGACAGTCA 
AGTACTATTA GATTGTAACA GAACATTTTT TGTGAACAAT GGACAATTTC ATTGTAGTAG 
TTGTTCATTA ATAGTCATCC CGTTCATTAA TAATAGTCAT CAACATTCAT TAGTTTTTTC 
ATTTAATAGC ACAACCAATA CCGCGCGGAC GTGTCCAAAT TTCGTCAAAA AATAGAAAAT 
GCGAAATGTG ATTTTGAAAA CTGTGAAA 

 

Protein sequence

MYGHLSLSTL SLLAVVAAAP FPESWLQPRD SDVSQLFRRG APDPKASDYL SYYPSPGSTP 
NVSTIPQAWL DKLATVQLPN VSVATANDGR PTYPNNENDG DSEICSFTDQ CYVEDDLYSP 
PGEKVWALSF DDGPTDVSPA LYDYLAQNNI SSSATHFMIG GNIITSPQSV LIAIEAGGHL 
AVHTWSHPYM TTLTNEQVVA ELGWTMQALS DLNGGRIPMY WRPPYGDVDN RVRAIAKGVF 
GLVTVLWDSD TNDWAISDQP DQYSVASVEA YFDTLVTGNR TQGLLLLEHE LDNNTVEVFE 
TEYPKAVANG WSVKNVADAF SMKWYLNSGK GNDDVVTTMS VAGTLTTAKP THTSTSVASA 
TATSSASVTD SAGVSIASAA SSQESSSWPI ANRPSLFVIA CGLALAAIMV