Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC04280 |
Symbol | |
ID | 3256258 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | - |
Start bp | 1298469 |
End bp | 1301616 |
Gene Length | 3148 bp |
Protein Length | 948 aa |
Translation table | |
GC content | 54% |
IMG OID | 638255649 |
Product | conserved hypothetical protein |
Protein accession | XP_570002 |
Protein GI | 58265692 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG5099] RNA-binding protein of the Puf family, translational repressor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.429962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACCG ATATCAGCAC TAGGCCCGAC TTCAAGGCCG ACGATCTTGT CTCCGCAATG GGCGAAGTGA CCCTCAATGG GTCTGGGAGG AATGGACATG AAGCTTTGGA CCTGGCAGAG ACTGTGCGTG GCTCATATTT TAGCGGGAAA GGATTGGTGG ACTAACGTAA ATCTAGGCCG AGGTTTCCAA CCAGGCTGTC CAGGAAGTGA GTTACAATCA TTCAAATTCA GGACGTCCCG CTGACGGAAA TGTAGCGCCT GGAACAGAAG CGTCTTGAGC ATGAACGGGC CCGCCTGGCC CAGCGTGCGA AATTCGAGCA GCAAATGCGC GAGCTTGAAG CCAACCAACT TGCAGAGGAA CGCCAACTCA TGTCCGCGAC TAGCCCTCTT CCCGCGGGCG AAGCCGCATC AGCCCCTACT ACGCCTCCCG GGCATGCTTC TCTTGGATCT TCGGTCCACG ATTTGCACAA AGAGGCTCCC GCACCCATTG GCTCCCTTGT GCCCGGTCCC AGAGAAGGTT TGAATGGAGC AAAGAGCATG CCTGGAAGCA GGAGGACAAG CACGTATGGC GGGACTTTTG GCATGGAGAA GATGAGCTTG AGTGTTATGA CCGATGGATC CAGGAGGGAG TGGAGGCAAG AAGACGACGA TGTTGATGCG GAGGGTGCGC AGAGTTAGTT TCGTTTTGGA CTTATTATTG TCATGTTTTG CTGATCAGTG TTCCAGGCTC AGTCAAATAC CTCGGCATGA ACGACGATGA CCCTTTCCCC GGCATCCCAA AGCAAGAATC CAAGCATCTC TCAGCTGCCT CTGCCGCCCT CGACCTTGCT CCCCTTTCCC AGACTCCTCC CCGAGCCTTT GGCTCCCGCC CTTTCGAAAC TTCCCTCAAA ACCTCGGAAT GGCCGCAGTT TTCTGCTGTT CCTGGTGCTT CCTCTGGTCC CGCTCGCGGT GTCACATCTC CTCTCCAGGC TTCCGGTATG ATGTCTGACG AGCTCCGTGA ACCTACATTG CTCGGCTCTC GAAAGACTTC TCCGACAGCT GGAATGGCCG ACAGCATCGC CAGCTTGCCG GCGATGCCTA GCAAGAGTGT CCCTGGCACT CCGTTCGGCT TCGGTGGTGC CGGTGGTGGT GGAGCAGGTG TCGGCAAGAG AGTTGATTCT GGCGAGGGGT TGAGTCACGG TCAGAGAGGA TTCTCAAACC CTGATTTGGC CAGAGCATTT GGCAAGGTCG GTGGCGGATT TTCTGTGGGG GAAAATGCTC GAGTAGGTCG CTTGTATCTC TTTCAACGTT TTAACTAATG GACAATAGCA GCCTTACAAT GATCTTTACA ACTCTTTCTC TCCCGTTAAC GCCAGTCTTC CCCCTTCTGC TGCTGTCGCC GCAGCCTTCA CTCCGCAGGT GGCGTATGAT CCCTACGGAT TCGATGAGGA TGGTTACGGT TCAGGATCTC TCTACCCTGG CGGATCCGTG GGTTTAAAGA ACAAGCGTGC TGATCAGGAT CGCGAGTTCA ACCGATTCGC AGGCGTTCGC ATTGAAGATC TCAAGGGCGA GCTTCTTTCT CTCTGTAAGG ACCAGCACGG TTGTCGCTAC CTCCAAAAGA AACTCGAAGA CGGCGACCCC AAACACCGTG ACATGATCTT CAACGAAACC TATGGCCACT TCCCCGAACT CATGACTGAT CCCTTTGGCA ACTACCTCTG CCAAAAGCTT CTCGAGTACT CTACCGAGGA GCAGAGGTCT GCGATCATTG ACTCCGTTGC CAACGACTTG GTTGGCATCT CTTTGAACAT GCACGGAACG AGGGCAGTCC AGAAGATGGT GGATTTCTTG GCTCAGCCTA GGCAGCCCAA GCAGATTAGG ACGTTGATCC TTGCTTTGAG CATGAATGTG GTGGCGTTGA TCAAGGATTT GAACGGTAAC CATGTAAGTC TTGTATCTTT TATCACGAGG TTGTCAATCT GATTGCCTCC AGGTCATCCA AAAATGCCTC AACAAGCTCA TCCCCGAAGA CAACCAATTT ATCTACAATG CTATCGCCGC CAATCTCATC GAGGTAGCCA CCCATCGTCA CGGCTGCTGT GTCCTCCAGC GTAGCATCGA TCACGCCTCT CCTGCTCAGA GGATGCAGCT CGTCACCGAA ATCATCTTCA ATTCTCTCTA TCTTGTGCAA GATCCTTTCG GAAACTATGT CATCCAGTAC ATCTTGGACC TGAACGATGC TAGGTTCTCT GAGCCGCTCA TCAGGACTTT CATTGGCAAT GTCTGTTCGC TGTCTGTACA GAAGTGAGTG TCAGCTTTCG CCCTTGTCCG ATGAACCAGT TTAACAACTT GTAGATTCTC TTCCAATGTT GTCGAAAAGT GTATCCGTGT GGCCGATCCC GAAATCCGCA AGGTGCTCGT CGGTGAAGTG CTCAACCGCT CTCGGTTGGA AAAATTGCTT CGCGACAGCT ACGGCAACTA TGTGATCCAG ACCATACTTG ACTACTGTGA GATTGGACAG CGTATGGTGC TTGTGGAGTG CATTCGTCCC ATCCTTCCTT CCATCCGCAA CACTCCTTAC GGCAAGCGAA TCCAATCCAA GCTTGCTCGG GAAGATGCGT CCTTCCAGCC TTACAACGGT TACAACAACA ACGGAAACAA CAGTAATCGA GGTCGCGGTG GTGGCGGTGG TGGCAATTAC CACTCTTCTC GTGGCCATAT TGGCCGTCCC CAGTTGCAGC ACGTCAACGC CCTTACGGAC ATCTATGGTG GTGGCGGCCC ATTCATGCAG TATGGCCACG CCCCTGCTGG ACACATGCAC CCTGCTCACG CGGGCTGGAC TCCCGGTAGG GAACCACCTC ACATGGGAGG CCCTACTCAC ACTGGTCTTT CCTACCATGC TCCCGGCCCG GATGGTCAAC CATGGTTGCA CCTCCGCGGA CCAGGCGGTG GTCCAGCTCC CAACTGGCAC TTGTCGCAGG ACGGATCCCA CGGCGGTGTT TTGCCTGGCG GCATGAACCC TCAGATGACA GGTGCTAGCG CTCAAGCAGG GGGTGCTGTT GGCGCTGGAG AGGAAGAAGG ATTGCAGGTC GGCGCTGGTG CGGGTGCGTG GCAGGATCCC CAGAGCGGAG GGTTCTACAA CGGGCCTTCT CACGTTCCGA TGATGTGA
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Protein sequence | MTTDISTRPD FKADDLVSAM GEVTLNGSGR NGHEALDLAE TAEVSNQAVQ ERLEQKRLEH ERARLAQRAK FEQQMRELEA NQLAEERQLM SATSPLPAGE AASAPTTPPG HASLGSSVHD LHKEAPAPIG SLVPGPREGL NGAKSMPGSR RTSTYGGTFG MEKMSLSVMT DGSRREWRQE DDDVDAEGAQ SSVKYLGMND DDPFPGIPKQ ESKHLSAASA ALDLAPLSQT PPRAFGSRPF ETSLKTSEWP QFSAVPGASS GPARGVTSPL QASGMMSDEL REPTLLGSRK TSPTAGMADS IASLPAMPSK SVPGTPFGFG GAGGGGAGVG KRVDSGEGLS HGQRGFSNPD LARAFGKVGG GFSVGENARQ PYNDLYNSFS PVNASLPPSA AVAAAFTPQV AYDPYGFDED GYGSGSLYPG GSVGLKNKRA DQDREFNRFA GVRIEDLKGE LLSLCKDQHG CRYLQKKLED GDPKHRDMIF NETYGHFPEL MTDPFGNYLC QKLLEYSTEE QRSAIIDSVA NDLVGISLNM HGTRAVQKMV DFLAQPRQPK QIRTLILALS MNVVALIKDL NGNHVIQKCL NKLIPEDNQF IYNAIAANLI EVATHRHGCC VLQRSIDHAS PAQRMQLVTE IIFNSLYLVQ DPFGNYVIQY ILDLNDARFS EPLIRTFIGN VCSLSVQKFS SNVVEKCIRV ADPEIRKVLV GEVLNRSRLE KLLRDSYGNY VIQTILDYCE IGQRMVLVEC IRPILPSIRN TPYGKRIQSK LAREDASFQP YNGYNNNGNN SNRGRGGGGG GNYHSSRGHI GRPQLQHVNA LTDIYGGGGP FMQYGHAPAG HMHPAHAGWT PGREPPHMGG PTHTGLSYHA PGPDGQPWLH LRGPGGGPAP NWHLSQDGSH GGVLPGGMNP QMTGASAQAG GAVGAGEEEG LQVGAGAGAW QDPQSGGFYN GPSHVPMM
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