Gene CNC03230 details

Gene Information

• Locus tag: CNC03230
• ID: 3256311
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006685
• Strand: +
• Start bp: 1019178
• End bp: 1021192
• Gene Length: 2015 bp
• Protein Length: 536 aa
• GC content: 48%
• IMG OID: 638255546
• Product: long-chain acyl-CoA synthetase, putative
• Protein accession: XP_569644
• Protein GI: 58264976
• COG category: [I] Lipid transport and metabolism; [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.295256
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTATGTCGCT GTTCTGTCTT GTAGTGCCGG TTTACACTAC TCAATCTCTC AAAAGTCCAA 
CCCCTCAACC CCTCCAACCA TTCCAGCATC TCATACATAA TACTTGGTGT CTATCTGGTA 
CTAAGTCGTT CAGTCATGAC TTCTCTCAAC TCCTTTCCTC TACTCGAGCG CATAATTGCT 
CGTGCTCAGT CCGCCCCTGC ATCCGAGGCC ATTGTGGATG TCCCCCATTC TCTCACCGTC 
ACATATTCGG AACTATGTGG CGATATCCTC TCTCTCGGCT CTATCCTTAC GTCTTTTCTC 
TCGGTGCCCG AAACTCGAGT CGTCGTTCTT TGCGACAAGG GCTACCTTGT TCCCCTCAGC 
ATGTTGTCCA TATGGACAGC AGGAGGACTG AGCGTCCCAG TTCTACCTTC TTTGCCTCTT 
CCAGAGCAAG CTTACATGGC GACTAATAGC GACGCTAGCC TTGTCATTTG TGATGCTAAT 
AATAAACCCC GCGCGGATGA GCTCAAGGCA GATATGGAGA AAGAGGGCAT AAAGACAACG 
GTACTTGAGA TCAGTTTGAA TGGGGTGAGA AAGGCAGCTT ACGACAAAAG TGGTGTTGAA 
ACCCTCAGCA AGATGTCAGA ACTCCATAGC GAGAGAAGGG CCATGATGCT CTTTACTAGT 
GGTACTGTAT GTGGAGTACT TTTTTTGGAT TGTGTAGTTT ATGTCAAATC TACTTTGGCT 
AACAATAGCT TTTAGACCGG TCGACCTAAA GGCGTAGTCA CACGACACTC GGCTCTCGGG 
GCCCAGGTAT CTGCCGTTGT CCAGTTCTGG CGCTGGACCT CGACCGATAA CCTCCTTCAC 
ATCTTACCGC TCAACCATTT GCACGGCATT GTCGTTGCTC TTCTTCCCGC CCTCTGGGCC 
GGGGCGACCG TTGAGCTCTG GGAAAAGTTT GACGCTCGAG GCATTTGGAT GAGATGGATT 
AATAATGAGG GTAAAACCCC TATAACTATG TTCTTTGGTG TTCCTACACT CTACTCTCGA 
TTAATCCAGT CTCATCCCAT GCTGCCCAAG GAGCTTCAGC CGATTGCTTC GGAGGCTTCA 
TCCAAGTTGC GTCTGCAAGT TTCAGGCTCT GCTCCCCTCC CTGAAAGCAT TAAAAAAACG 
TGGGAAAAGG AGGGAGGTAT TGGAGGCGGA CAAGTATTGT TGGAGCGATA CGGAATGACA 
GAAACAGGCA TAATTGCTAG CACCGGCTGG GAGAATGACA AGAGAGTGAA AGTGAGTAAT 
GGATGTTCCC GTCATGCAAG TGTTAACTTA CCAATGTGCA TTGAAAGGGA CATGTCGGTT 
ACGCTCTTCC TGGAACCGGA ATTCGACTAT GGAATGAAGA CTTGAATCAG TCCATCACTG 
CCTTCGACAC TCAAGGTGAA ATTCAAGTGC GTGGTCCATC CATCACAACA GAGTACTGGC 
GCCTTCCTGA GGCCACAGCC AAAGAATTTG TGGACGGCTG GTTCAAAACT GGTGATATTG 
GTGTGTGGTC TTCAGATACT GCAGCTCAGA ATCAATTGAA GGTGCTAGGG AGGAAGAGCA 
CCGACATCAT CAAAAGTGGC GGAGAGAAAA TTAGTGCGGT GGAGATTGAA AGAGCCATCT 
TGGAACTCCC CGGTATGAAA GATTGCGCAG TCATGGGTGT TGAAGACGAG GAATGGGGTC 
AGATCGTAAG GATTGTCTGC GGCAATTTTG GGTTTTGTGC ACTAATTCCA CGGCAAGGTT 
TCGGTATGTT TGGTAACCTC CCGTCCGAGC GTGACAGTCA ATGAGATTCG AAACGAGCTT 
CGAAGCGTCC TTGCGCCGTA CAAGCTCCCA AAGTTGCTCA AGCTTTACGA GGGTGAAATC 
CCGCGAAATG TGAGTGCTTT ACAGTGGGTC GATTGAAATC TAAGAAACGA CCGCTGATTT 
TCACGTTACA GAACATGGGA AAGGTAAATA AGAAGAAGCT TGTTTTGGAG GCCTTCCCTA 
AATGAATTGT GAGATATATC AGGATATGCT TACAG 

 

Protein sequence

MTSLNSFPLL ERIIARAQSA PASEAIVDVP HSLTVTYSEL CGDILSLGSI LTSFLSVPET 
RVVVLCDKGY LVPLSMLSIW TAGGLSVPVL PSLPLPEQAY MATNSDASLV ICDANNKPRA 
DELKADMEKE GIKTTVLEIS LNGVRKAAYD KSGVETLSKM SELHSERRAM MLFTSGTTGR 
PKGVVTRHSA LGAQVSAVVQ FWRWTSTDNL LHILPLNHLH GIVVALLPAL WAGATVELWE 
KFDARGIWMR WINNEGKTPI TMFFGVPTLY SRLIQSHPML PKELQPIASE ASSKLRLQVS 
GSAPLPESIK KTWEKEGGIG GGQVLLERYG MTETGIIAST GWENDKRVKG HVGYALPGTG 
IRLWNEDLNQ SITAFDTQGE IQVRGPSITT EYWRLPEATA KEFVDGWFKT GDIGVWSSDT 
AAQNQLKVLG RKSTDIIKSG GEKISAVEIE RAILELPGMK DCAVMGVEDE EWGQIVSVCL 
VTSRPSVTVN EIRNELRSVL APYKLPKLLK LYEGEIPRNN MGKVNKKKLV LEAFPK