| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC00800 |
|---|
| Symbol | |
|---|
| ID | 3256816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | + |
|---|
| Start bp | 224941 |
|---|
| End bp | 227592 |
|---|
| Gene Length | 2652 bp |
|---|
| Protein Length | 789 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | 638255298 |
|---|
| Product | biotin-[acetyl-CoA-carboxylase] ligase, putative |
|---|
| Protein accession | XP_569382 |
|---|
| Protein GI | 58264452 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4285] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGGCC CGACACCGTC AGCGCACCAG GTGCTCGTGT ACTCGGGCCC CGGGGTGTCG
CCGCTCTCCC TCTCGCACAC CCTCCTCACC CTCCGCCTCC TCCTGCTCCC CCACTACACC
GTCCAGCCCG CAGCCCCAGA CCTCCTCGCA CTCCAGCCAT GGGAACCGTC CTGCGCACTC
CTCGTCGTCC CAGGCGGCAG GGACCTTCCC TACGTCGACG AGCTCACGCA CAAGCGGCCC
GTCACAAACA GGATCAGAGA GTATGTCCAG CAAGGCGGCC GCTTCTTGGG CATATGTGCC
GGAGCGTACT TTGCCAGTGC CGAGGTGAGG TTTGATGTCG GAGGCGGTAT GGAAGTTGCC
GGGAAGAGAG ATTTGGTGCG TTTTTTTGCG ATGTGGAACA GGTTTCGAAC TGCGTGCTGA
CGGTGCGAAT CAGGCCTTTT TCCCTGGGCC TAGCAGAGGA CCCGTATTCC AAGGTTTTCA
ATATGCGTCT GAATCCGGAT CCAGGGCTGT CGTCCTCAAC CTCGAATCTT CCAAGCTCGA
GACACTCAAC CACATCTATT ATAACGGCGG CGGCCAATTC ATTCTCCCTT CGCCTCCCCC
TCCAAACGTC CAAATCCTCG CTCGCTTCCA AGAAACTTGT TCCGACCCAT CAGGACAACA
ACAACAACAA CTCGTCGCCG CCGTCTTCAC CCAAAACGGC AAGGGCTGCA CCGTTCTCTC
CTCTGTCCAT CCAGAATACC CTCTCTCCGA CCCTCCGGCG AGTAACGCCA TTGCTAAACT
GGACGTGCGG CCGTCCCAGG TGGAGGTTGA GATGAGCGAC AAGGCTCGTT TGTCGTGGGT
CGAGGAGTTA CTCATCAAGC TCGGTTTGAC CCCTCCCGAA CGTCTTACCG CCGCAAACCG
GGCCAAATCC TCAGCCGACT CGGAGCACGA GGATGAAGAC CCGGCTCTCC TCCTTCACCC
CACTCACCCT TCACCCATCT TTTTCTTGTC TCATCCCAAC CTGCCGCAGT TACCCGAGGC
AGCTGTGAAC AAGCCAGAAC TCAAGGGCAA GATGGAGCAA AGAGATGGGT GGGATGTTTT
GAGGGATGCG AACGATGAGA TTCGTTTTGG TACGACGGAA GCTACCTCGC CTGAACGAGC
AGCCTCTGAA GATGGTATCA CGCAATGGCT TGCGCAAGCC CGTCGTACCC AGCCCGTGTT
CCCACCTTCC GTCGAAGATC TTTCGATACA ATCCGACTCT ACCCCACAAC CTCCCTCTCC
ACCCGATTTG CACGCTCTCA CCAAAACCAT CCTCCTTCCT TCGCCTTCAG TCGAATACTC
TTCCAGATGG ACTCCATTGT TCAACTTTTC TACTTACTGG GATGAGCTTG ATCAGGCAAG
GAAGAGGAGC GGTAGACGTT CAGGCGTGAT GCGGCAGGGA TCGGATGGAC AGGGCGAGCG
GTGTTCATTG GGTGACTGTG TCTTGTACGG TGAAACAGTG ACGAGTACTC AGACGATGCT
TGACGGCAAC CCCCTTCTCC TCACCAATCT CCCTACACCG CTCGTCTTCC TCGCGTCTTT
CCAACTTTCC GGCCGAGGTC GAGGCTCCAA CATGTGGTTA TCCCCACCTG GCTGTCTCCA
ATTCTCACTG CTTCTCGACC TCCCCGCTTC CCTTTCATCC AAAATGGTTT TCATCCAATA
CATCATGGCT CTTGCCGTCT GTGAAGCTAT CGATGAGGAT GGGAGATTAG GTGTTAGAAT
CAAGTGGCCG AACGATATCT ATGCCGAGGT TGAAGGCGTG GGTGGGACGG AGATCGGTAG
TGGAAAAAAG GGCAAGGCCA AGTTGGGTGG GATCTTGGTG AACACTAGTT TTGTCGGCGG
GAAATGGAGA ATTGTTGTTG GTAAGCTTTG CATTTTTTTT TGCAACCCAT TTTATCCTAC
TTCACCCCCT TCTAATGACC TGTTTCTACA GGATGTGGTA TCAACATTCT CAACGCTCTT
CCCACATCAT CCGTCTCCCA ACTACATGCT TTACTCGCCG CCAAACTTTC TTCCACATCA
TCTAATAAAC CTCTTCCGCC TGCACCTACC ATGGAGGGTA CCTTTGCTCG CATCATGAGT
TCCTTTGATG CGAAATGGGA GCAATTCATC GAGGAGAAGG GTTTCAAAGG GTTCATGGAT
GAATACCACG GAAGGTGGTT GCATTCGTCG GTTTTTTTCT TTTTCTTTAT CCCCATTGAT
TGTTCCGTTT CCATGATCTC ATACTGACTT TTTTGTTAAT TATTAGAGGG CAAGACGTTC
TCCTCACTAC CACCGAACCC CACACTCGCG TCCGTATCCT CAGTATCACC CCAGACCACG
GTCTTCTCCG CTGTATCCCC ATCTCCGACA AACCTAAAGC CTCCACCGGT CTCACACCCC
TGTACAACAG GGACATTGAC GCCGGCGAGG ATGATCGTGG TTCGTGGTCT TCTTCTCCCT
CTGTTCCTAG GTCTGGAGCT GCTCGAGCCC AAACGCAGAA CCACTCACCG TTTGTCGACC
TCCAGCCAGA TGGGAACAGT TTTGATTTGA TGAGCGGGTT GATCAAGCGG AAAGTATAAG
GGGTTCTGTG TATTGTAGGT ATAAAAAGCT CGACATTGAC ATCCTGTCTT TATGAAAGGT
TGTACTCCTC TT
|
|---|
| Protein sequence | MPGPTPSAHQ VLVYSGPGVS PLSLSHTLLT LRLLLLPHYT VQPAAPDLLA LQPWEPSCAL
LVVPGGRDLP YVDELTHKRP VTNRIREYVQ QGGRFLGICA GAYFASAEVR FDVGGGMEVA
GKRDLAFFPG PSRGPVFQGF QYASESGSRA VVLNLESSKL ETLNHIYYNG GGQFILPSPP
PPNVQILARF QETCSDPSGQ QQQQLVAAVF TQNGKGCTVL SSVHPEYPLS DPPASNAIAK
LDVRPSQVEV EMSDKARLSW VEELLIKLGL TPPERLTAAN RAKSSADSEH EDEDPALLLH
PTHPSPIFFL SHPNLPQLPE AAVNKPELKG KMEQRDGWDV LRDANDEIRF GTTEATSPER
AASEDGITQW LAQARRTQPV FPPSVEDLSI QSDSTPQPPS PPDLHALTKT ILLPSPSVEY
SSRWTPLFNF STYWDELDQA RKRSGRRSGV MRQGSDGQGE RCSLGDCVLY GETVTSTQTM
LDGNPLLLTN LPTPLVFLAS FQLSGRGRGS NMWLSPPGCL QFSLLLDLPA SLSSKMVFIQ
YIMALAVCEA IDEDGRLGVR IKWPNDIYAE VEGVGGTEIG SGKKGKAKLG GILVNTSFVG
GKWRIVVGCG INILNALPTS SVSQLHALLA AKLSSTSSNK PLPPAPTMEG TFARIMSSFD
AKWEQFIEEK GFKGFMDEYH GRWLHSGQDV LLTTTEPHTR VRILSITPDH GLLRCIPISD
KPKASTGLTP LYNRDIDAGE DDRGSWSSSP SVPRSGAARA QTQNHSPFVD LQPDGNSFDL
MSGLIKRKV
|
|---|
| |