Gene CNB04280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB04280 
Symbol 
ID3255960 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand+ 
Start bp1248226 
End bp1249234 
Gene Length1009 bp 
Protein Length252 aa 
Translation table 
GC content49% 
IMG OID638255073 
Product20S proteasome subunit, putative 
Protein accessionXP_569251 
Protein GI58264190 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0638] 20S proteasome, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.0748663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCTC CCGGTGGTGG TGGTGCTTAC TCGTGAGTCC ATCGTCGTGA TCTCAAGTCT 
CAAGCGACAT TGATACGTCT AAGCGGTAGA CTGACAACTC GGTAGATTTT CCCTTACAAC 
CTTCTCCCCT TCCGGTAAAC TCGTGCAAAT AGAACACGCC CTTGCCGCTG TTGCCGGTGG 
GACTACTTCT TTGGGTATCA AGGGTAAGTT CAACGCCATC TCTCTCATGC CCCTTTTGCT 
TACCATGAGC CTTCCCTTAT AGCTACCAAT GGTGTTGTGA TCGCCACCGA GAAAAAGTCT 
CCCTCCATCC TCCTCGACAC CTCTGCTCTT GAGAAGGTTG CCCCGATTTG CCCCAATATC 
GGCTTCGTTT ACTCTGGTAT GGGCCCTGAT TTTAGGGTGC TTGTCGCCAA AGCTAGGAAG 
ATTGCGCAAG CATATTGGAA GGTGTATGGA GAGTATCCTC CCACAAAGGT CTTGGTGCAG 
GAGGTGGCTG CTGTTATGCA AAAGGCGACT CAGTCTGGGT AAGTCGGCAA TGTGCACACT 
GGCTTTGCTG CAAGTCTCGT CGGACTGATA GATAACCGCA GTGGTGTGAG GCCGTACGGT 
ATTTCTGTGC TTATTGCTGG ATGGGATTCC CACAGGGGTC AGTCCTTATG GCAAATTGAC 
CCTTCAGGAT CTTATTGGGC ATGGAAGGCG AGTGCGATCG GGAAAAACAT GGTGAACGGC 
AAGACTTTCT TGGAGAAGCG GTGAGTCACT CGGTTTGACA ACTTACCCTA AAATCAAAAT 
TCATGCCTTT TTCAGATACA ACGATGATCT TTCCCTCGAA GATGCCATCC ATACTGCTCT 
CCTCACTCTC AAAGAGGGCT TTGAAGGCCA AATGACAGAA CAAACTATCG AAATCGGTAT 
TGTAACATGT CCTACGCCCG AGCAGATGCA GGAAAAGCCT GGGGAGAGGT TGCCTCCTAC 
ATTTAGGAAG TTGACTGAAC AGGAAGTAAA GGATTACCTT TCGTTGTAG
 
Protein sequence
MSAPGGGGAY SFSLTTFSPS GKLVQIEHAL AAVAGGTTSL GIKATNGVVI ATEKKSPSIL 
LDTSALEKVA PICPNIGFVY SGMGPDFRVL VAKARKIAQA YWKVYGEYPP TKVLVQEVAA 
VMQKATQSGG VRPYGISVLI AGWDSHRGQS LWQIDPSGSY WAWKASAIGK NMVNGKTFLE 
KRYNDDLSLE DAIHTALLTL KEGFEGQMTE QTIEIGIVTC PTPEQMQEKP GERLPPTFRK 
LTEQEVKDYL SL