Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNB03230 |
Symbol | |
ID | 3256056 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006684 |
Strand | - |
Start bp | 974361 |
End bp | 975943 |
Gene Length | 1583 bp |
Protein Length | 346 aa |
Translation table | |
GC content | 50% |
IMG OID | 638254967 |
Product | sphingosine hydroxylase, putative |
Protein accession | XP_568900 |
Protein GI | 58262980 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTAGTCTTCC CCTGCCCGCG CTGCTGCCCC CCAGCCTTCC CCGGCCTCCA ACGCCACCGC CTTAACCATC CGCACGTCCC CCCAAGTACA CCGCCTGTTC ATTGCCTGCC CGAACATCTC CTTCGGAGCA TCTCGCCACT CCGTTTCCTG CCTCCGCCTA TTTCAACTCG TCTCTTGCAG TAGCCCCACT CTCCTTATCG CCACCATGGC TTCGTTTTTC CCTTACCAAC ACGCCTACGC CCACAACTCT ACAATGCTCT CGAGCATTAC TCCTACCGCC CTCCATGCCC CTTTCTACCA CACAACTCGT CCCAATCTTC TCTCATTCAT GTCCGACAAA TACGTTTCAC TTGCGGCCCC CGTGCTGGCT TATTGGCTGT ACTCATTCTT CTTCCATTTT CTCGACACGG CCCAATTCTC CTATTTTGAA AAACGCAGAA TACATGACTC GCCTGAAGTG CTGGCGCGGA ACAAAGTCAC AGTGGCGCAG GTGATCAAAG CGGTCATTTT GCAGCATGTC ATTCAAACAG TCCTAGGCAT GTTCTGGCTT GAGGACGATG AAGTGATATT CAGAAGAGAA GTTATGAAGG ACCATCTTGC GGCCATGGGT AACCTAGCGC CTTGGGTGGC CGATGGGGTT TTGCTCGTGC TTGGAAGAAG AATAGGAGAA CAGGTGCTGA AAAGCAATGG TGAAGCAATT GTTCGTTGGG TGTACTGGTG GGGCATCCCT GCTTTGCAAA TGCTTTTTGC CTTGTGAGTA ATCTCTTGCG GTTTAACAAA AACATTTTAC TAATGTTGAA CATAGCTTTG TGATTGACAC TTGGCAATAT TTTTGGCACC GATCCATGCA CACAAATCAC TGGCTCTATC GCAACTTTCA CTCCCACCAC CATCGTCTCT ATGCCCCTTA TGCTTTCGGC GCTCTCTATA ATCACCCCGT GGAAGGCTTC ATTCTTGATA CTCTCGGTGC CGCCATAGCC GAAGAGGTTT CTTTCATGAC CATCCGACAA GCGACTTTGC TCTTTACGGT CTCGACTCTC AAAACCGTAG ATGATCACTG TGGTTACCGA CTATGGTGGG ATCCTTGCCA GCTCTTCTTT GCCAACAATG CCGATTACCA TGACATCCAT CATCAGGGCT ACGGTATCAA GTCCAACTTT AGCCAGCCAT TTTTGTGAGC AAAGGATTTT AAACCGCCAA GCAACAATAC TGACTACCTC TCTGTAGCAC CAACTGGGAC AAACTGCTTG GGACCAGAAT GACTCGCGAA GAGGCCGACT CCAAGGGGCG TTGGAGGAGT GTCGGAGGTG AGCATGTCTT GGAACAAGGA CCGGCCAAGA AGCTGGACTA AGTGTCGAAG TCGTGTCTGT CATGGGGAGT TGGGTTCCTT TCATATCTTC AATTCATCTG TATAAACATT ATTCACTACA TCTTCATATC ATATAATTAC TTTCTCCTTC CATGGAGTCT GGGCCCTTGC TGTAGGGTGG GGGTTAATAT CATTGTGTTT ACATCTGCTC CAAGGTGATT TCCAACTTTG CGGGTGGGAT GAAATGGCGG AACGGCCTGT GTGTTGGTTT TAA
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Protein sequence | MASFFPYQHA YAHNSTMLSS ITPTALHAPF YHTTRPNLLS FMSDKYVSLA APVLAYWLYS FFFHFLDTAQ FSYFEKRRIH DSPEVLARNK VTVAQVIKAV ILQHVIQTVL GMFWLEDDEV IFRREVMKDH LAAMGNLAPW VADGVLLVLG RRIGEQVLKS NGEAIVRWVY WWGIPALQML FAFFVIDTWQ YFWHRSMHTN HWLYRNFHSH HHRLYAPYAF GALYNHPVEG FILDTLGAAI AEEVSFMTIR QATLLFTVST LKTVDDHCGY RLWWDPCQLF FANNADYHDI HHQGYGIKSN FSQPFFTNWD KLLGTRMTRE EADSKGRWRS VGGEHVLEQG PAKKLD
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