Gene CNA05950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA05950 
Symbol 
ID3253903 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand
Start bp1593460 
End bp1594334 
Gene Length875 bp 
Protein Length165 aa 
Translation table 
GC content49% 
IMG OID638252915 
Productcytosine deaminase, putative 
Protein accessionXP_566948 
Protein GI58259071 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.275444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAACCACACT GGCCCAACAA ACCATGTCCC CCGTAGAAGG ATCACCAGCC AAGCCAGAGG 
ACTATCCTCA CTTTATGAGC GTGTACGTTC TAATTCCCAT TGGGCAGGCG GGCGAGATAA
GCGAGAGTAA GGGTGAGATT ACAATCACAG CGTTTGGCAG GTTCAACCAT ACCCATACAA
CAACCGGTGG CAGAGTGAAA GATGCACGCA GTCAAAAAAT ATAGATATAT ATATGTATTG
ATACAAGCTG ACCAGAAAAA AACACACTCA ATTTAAAATA GTGCCCATGA ACAAGCCTTA
AAGAGCCTTT CGGAGGGCGG TATCCCCATC GGGTAAGCCC GTCCTTCCTC GTCTGCTTAC
TACAACACGT TGATCCTCAT CACTTACCCC CCCCACCGCC AGCGCCGCTT TGGTCCACCT
TCCTACCTCC CGTATCATCT CCCGCGGACA CAACAACCGT GTCCAGCTCT CGTCCAACGT
CCGACATGGA GAGATGGACT GTCTCGAAAA CTTGGGACGG GTACCAGAAG GCTTGTTAAG
CGAGTGTGCA ATGTTCACCA CCTTGTCGCC TTGCATCATG TAAGTTACTC CCTCTCTCCC
TCTGTGTGAT TCTACTTTGT GCAAAGTGGA AGATGAGGCT GATTCTTCCG TCAAGGTGCT
CCGCAACTTG TATCCTCTAC AAAATCCGTA CCGTCGTTCT CGCCGAAAAC GAAAATTTTT
TGGGCGGGGA ACAACTCCTC CGTGATAACG GCGCCAACGT TATCAACCTC GATTCTGAAG
AGATTAAAAA CATGATGAAA AACTGGATCA ACAGTCCGCG GGGTAAAGTG TGGAATGAGG
ATATCGGAGA GGTCACAGGA TCGTAATACA GGAAG
 
Protein sequence
MSPVEGSPAK PEDYPHFMSV AHEQALKSLS EGGIPIGAAL VHLPTSRIIS RGHNNRVQLS 
SNVRHGEMDC LENLGRVPEG LLSECAMFTT LSPCIMCSAT CILYKIRTVV LAENENFLGG
EQLLRDNGAN VINLDSEEIK NMMKNWINSP RGKVWNEDIG EVTGS