Gene CNA00090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA00090 
Symbol 
ID3254004 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand
Start bp30054 
End bp30884 
Gene Length831 bp 
Protein Length216 aa 
Translation table 
GC content44% 
IMG OID638252337 
Productconserved hypothetical protein 
Protein accessionXP_566441 
Protein GI58258057 
COG category[K] Transcription 
COG ID[COG1958] Small nuclear ribonucleoprotein (snRNP) homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0822069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGTA CAATCCTCCC CCTCGAACTT GTCGACAGAT GTATCGGCTC CCCTATCTGG 
GTCTTGATGA AGAATGAACG AGAGTTTACT GGGACTTTGA TGGGTTTCGA TGACTATGTT
AGTGAGTATG ATTCAGTTTA TTTGATGACG AAAGGTGTTT GGATTTGGGT AAAGGTTTGA
GCTTACGATA TATTCCATCT CCTTTTAGAC ATGGTTTTGA AAGATGTCAA GGAATAGTCA
GTTTAGTTCC TTAATCAAAA CAATCAACTT CAACAGATTG AGGAGATGTG CTGATCAAGG
AATTATCTGT TGGTTGTTGT CGACAACAGC GAAGTTACTG CTTCGGGAAT CACAGAGACC
GATCTTGGGG ATACTTTGTT AAACGGGAAC AACATCGCCA TGGTACGTAC AACTACCCAT
CTTCCCTCGC CTCTCGAAAT CGAGCTTTGC TCTTGGTATG GCTATTATTG TACTATCAGC
CGTAATGGCA TGTCTGCTCC TTTCTTTTTG GGAAGAGACT GCTTTCCACG GCGAGATTTC
ATGCTATGTG TCTTGTGGGG AAGAGAATAC TGGGGGCGGA ATGCTGATAT ATTTCCTTCC
TACCCACACA GCTTATACCA GGTGGCAAGG GACCCAAGGC TTAGATCCTA TCCATCCATC
CATCTCCCGA CAAATACAAA TACAACAAAT CATAAAACAC CAACCACTAT TATGAATATC
GAGATGAAGA TGAAGGTGCT GAGGCAGAGG GACAATACGG GACGGAAAAG GAGTGATGTT
GATGTGGCAG GATACCGTCG GCAGTTATGG ATCGAGATTG GTCTGGGATG A
 
Protein sequence
MASTILPLEL VDRCIGSPIW VLMKNEREFT GTLMGFDDYV NMVLKDVKEY EVTASGITET 
DLGDTLLNGN NIAMVRTTTH LPSPLEIELC SWYGYYCTIS RNGMSAPFFL GRDCFPRRDF
MLCVLWGREY WGRNADIFPS YPHSLYQVAR DPRLRSYPSI HLPTNTNTTN HKTPTTIMNI
EMKMKVLRQR DNTGRKRSDV DVAGYRRQLW IEIGLG