| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE1228 |
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| Symbol | mfd |
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| ID | 3231735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni RM1221 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003912 |
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| Strand | - |
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| Start bp | 1141978 |
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| End bp | 1144914 |
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| Gene Length | 2937 bp |
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| Protein Length | 978 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 637292582 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_179216 |
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| Protein GI | 57237967 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCTT CATTTTATGA ATACTTACAA AATCCAAAAA TTTGTGAACT TTTTCTTTGT
AAAGATGAAA AACAAGCAGA TTTACTCGCT CAAGTTTCAC GATTTAAGGG TTTAAAAACC
TTTGTTTTAC CTGATTTTAG AGCGCAGTTT GGAGATGATT TAAGGGCTTT TTCTAAAGAA
CTTTTTGATC TTTGTAAGAT TTTAAATGCT TATCATAAAG AAGAAGAAAA AAAAATCCTT
ATTTCTCCTT TAAATACTGT TTTAAAAAAA CTTCCTTCAA AAAAACATTT ACAAAATTAT
CATATCGATA AAAAACAAAA TTTTGATTTG AAATGTTTTG AAGATGAAAT TTCAAGATTG
GGATACGAAT TTGTAGATAT AGTTCAGGAT AAAGGTGAAA TTTCAATTCG TGCGGATATT
ATTGATATTT TTTGTATCAA TGAAGAAAAT CCTATTAGAA TTTTACTTTT TGGCGAAGAG
ATTGAAAGTA TAAGATATTT TGATTTGCAA AGTCAAAAGT CTATTCCTAA CGAACTAGAA
CATTTTGAAA TTTGTCCTTT TTTAAAATAT TTTGACAAAG AAAATTATGA AATTTTTAAG
GACAAATTAG AAGATTTTCA AAGCGATACT TTAATACATG ATATCAATTC TTTAGGGTTT
TGGTGTATTG ATGATTTTTT TGATTATTTA GAACTTGATT TTTTAGCTTG TGAAAAGTTT
GATATTAATG AATATGAAAA AGATATAAGT TTTGTGAATG CAAAAATTTT ACCTCAAGCT
AAAAAATTTA AAGAATTGCA AAGTTCTTAC AATAAAGATT TTTTTGAATT TCATAAAAAT
AAAAAAATCA CACTTTTAGC TAAAAACGAA GCTTTATTTA AAGCTTTAGA GCTTGAAGAT
ACTCAAAATA TCCATTTTGT AAAAAGTGAT TTAAGGCTTA ATCTTATTAG TCCTGAAGAG
CTAATTATTT CTTTAAATCA AAAAGAAAAA CAAAAAACAA GAAAAAAAGC TAGTTTGATT
ATAGATGAGC TTAAAAATGG GGATTATATA GTACACGAAG ATTATGGGGT AGGTAAATTT
TTAGGTCTTG AGATGATAGT GATAAGCGGA GCAAAAAAAG AGTTTGTTGC TATAGAGTAT
CAAAATTCTG ATAAGCTTTT ATTACCAGTG GAAAATCTTT ATTTGATTGA TAAATATTTG
GGCGTGAGTG GATCTATTCC AAGCTTAGAT AAACTAGGTA AAACAAGCTT TATTAAACTT
AAAGAAAAAT TAAAGACTAA ACTTTTAGCC ATAGCTTCTG AAATTGTTAT TATGGCGGCT
AAAAGATCTT TGGTGCAAGC AAAAAAAATT ACAGTGGATT TAAATAGACA GACTGATTTT
ATAGCTAGTG CGGGTTTTAT TTATACAAGC GATCAAGATA AAGCCTGTCA TGAAATTTTG
CAAGATTTTC AAAGTGGAAA AGTCATGGAT AGGCTTTTAA GCGGTGATGT GGGTTTTGGA
AAAACAGAAG TCGCTATGAA TGCTATTTAT CCAGTAGTTA AAAGTGGATT TTGCGCATTT
TTATTTGCGC CTACGACTTT GCTTTCTCAT CAGCATTATA AAACCTTAAA AAAGCGTTTT
GATCCTTTTG ATATAAAGGT TTTTAAACTG GATCGCTTTA CAAGTAGTGC AGAAAAAAAA
CAAGTTTTAC AAAATTTAAA AGAAAATAAA GCTTGTGTAG TTGTAGGAAC TCATGCACTT
TTAAGTGTAG AATGTGAAAA TTTAGCCCTT GTTATTATTG ATGAAGAGCA TAAATTTGGA
GTGAAGCAAA AAGAAAAGCT TAAAGAAATC ACTCAAAATT CACATATTTT ATCCATGTCA
GCAACCCCTA TACCAAGAAG CTTAAATCAA GCTTTAAGTT CTATAAAATC TTATAGTGTT
TTGCAAACTC CACCAGAAGA TAGAATGGAT GTAAGAACTT TTGTCAAAGA AAATGATGAC
GCACTTTTAA AAGAAGCTAT AGCAAGAGAG TTAAGACGTG GTGGGCAAAT TTTTTATATT
CATAATCATA TTGCAAGTAT AGAGCAATGT AAAAAGCATT TATTAGAACT TTTTTCTACT
TTGCGTATTT TGATTTTACA TTCTAAAATC GATGCCAAGA TGCAAGAAGA AGAAATGTTG
AAATTTGAAA ACAAAGAATA TGATTTGCTT TTAAGTACCT CTATCGTAGA AAGTGGGATT
GATTTACCAA ATGCAAATAC TATCATAGTA GAAAAAAGCG ATCGTTTTGG CATGGCTGAT
TTGCATCAAT TGCGTGGGCG TGTAGGAAGA AGTGATAAGC AAGGTTATTG TTATTTTTTA
ATTGAAGATA AAAATGCTAT CACAAAAGAT GCTTTAAAGC GTCTAGTTTC CTTAGAAAGT
AATTCTTTTT TAGGCGCAGG TTCTATTTTG GCTTATCATG ATCTTGAAAT TCGTGGCGGT
GGAAATTTAT TAGGCGTAGA TCAAAGTGGA CATATTGAGC AAATTGGATA TAGTTTATAT
CTTAAAATGT TAGAAGATGA ACTTAATGCT TTAAGTAAAA ATGAAGTGGA TCAAAAAGAA
AATAAACTTG ATTTAAAACT CAATGTTAAT GCCTTTTTAA ACAGCGAACT TATCAGCGAA
GATCGCTTAA GATTAGAACT TTATAGAAGA CTTAGCAAGT GTGAGCAAGT TCATGAGGTT
TATGAGATCG AAGGTGAAAT TGAAGATCGC TTTGGAAAAC TTGACATTTA TACTAAGCAA
TTTTTATCTT TGATTACTAT TAAAATTTTA GCTTTAAATA AATTTAAAAG CATTAGTAAC
TATGAGCAAA ATATTCAATT TACTGCTTTA AATGATGAAA AAGAACTCAT CAAGGCAAAA
AGCAAAGATG ATGATGATAT TTTAGAGGCA ATTTTAACGC ATTTAAGAAA GGCTTAA
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| Protein sequence | MQASFYEYLQ NPKICELFLC KDEKQADLLA QVSRFKGLKT FVLPDFRAQF GDDLRAFSKE
LFDLCKILNA YHKEEEKKIL ISPLNTVLKK LPSKKHLQNY HIDKKQNFDL KCFEDEISRL
GYEFVDIVQD KGEISIRADI IDIFCINEEN PIRILLFGEE IESIRYFDLQ SQKSIPNELE
HFEICPFLKY FDKENYEIFK DKLEDFQSDT LIHDINSLGF WCIDDFFDYL ELDFLACEKF
DINEYEKDIS FVNAKILPQA KKFKELQSSY NKDFFEFHKN KKITLLAKNE ALFKALELED
TQNIHFVKSD LRLNLISPEE LIISLNQKEK QKTRKKASLI IDELKNGDYI VHEDYGVGKF
LGLEMIVISG AKKEFVAIEY QNSDKLLLPV ENLYLIDKYL GVSGSIPSLD KLGKTSFIKL
KEKLKTKLLA IASEIVIMAA KRSLVQAKKI TVDLNRQTDF IASAGFIYTS DQDKACHEIL
QDFQSGKVMD RLLSGDVGFG KTEVAMNAIY PVVKSGFCAF LFAPTTLLSH QHYKTLKKRF
DPFDIKVFKL DRFTSSAEKK QVLQNLKENK ACVVVGTHAL LSVECENLAL VIIDEEHKFG
VKQKEKLKEI TQNSHILSMS ATPIPRSLNQ ALSSIKSYSV LQTPPEDRMD VRTFVKENDD
ALLKEAIARE LRRGGQIFYI HNHIASIEQC KKHLLELFST LRILILHSKI DAKMQEEEML
KFENKEYDLL LSTSIVESGI DLPNANTIIV EKSDRFGMAD LHQLRGRVGR SDKQGYCYFL
IEDKNAITKD ALKRLVSLES NSFLGAGSIL AYHDLEIRGG GNLLGVDQSG HIEQIGYSLY
LKMLEDELNA LSKNEVDQKE NKLDLKLNVN AFLNSELISE DRLRLELYRR LSKCEQVHEV
YEIEGEIEDR FGKLDIYTKQ FLSLITIKIL ALNKFKSISN YEQNIQFTAL NDEKELIKAK
SKDDDDILEA ILTHLRKA
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