Gene CHU_3780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3780 
Symbol 
ID4183802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4373021 
End bp4373389 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content41% 
IMG OID638073766 
ProductXRE family transcriptional regulator 
Protein accessionYP_680355 
Protein GI110640145 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTTA TTTATATTAT GTCGTATATA AGCAACATAA ATAATTGGTA TGTGCTGAGT 
GATACAGCCA TTATTGAACA ATTGGGAAAA GAGCTTAAAC GCATGCGTCT AAAAAATAAT
CTTACCCAGC AGGAACTAGC AAACCGTTCG GGTTTATTCC GCAGTACCAT CAGTGAAATC
GAAAACGGAC GTGTGGGGAG TCTGTTAAGT TTGATTCAAT TGCTGCGTGC ATTGGATAAG
CTGGAACTGT TAGATGCTTT TGTAATAAAA GAAGAACTCA GTCCGTTGCT GGTTGCCGAA
CAGCAGGCGA AGCTGCGCAA GCGTGCATCA AACAAACGCA AACCTGATAA ACCAGAAAGC
GAATGGTAG
 
Protein sequence
MSFIYIMSYI SNINNWYVLS DTAIIEQLGK ELKRMRLKNN LTQQELANRS GLFRSTISEI 
ENGRVGSLLS LIQLLRALDK LELLDAFVIK EELSPLLVAE QQAKLRKRAS NKRKPDKPES
EW