| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3603 |
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| Symbol | rho |
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| ID | 4184809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 4156736 |
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| End bp | 4158457 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638073590 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_680179 |
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| Protein GI | 110639969 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.177753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAACA TTGAAGAATT AGATTTAAAG CTATTATCTG AACTACGAGT TATAGCTGAA
AAAATGAATG TTCCCAATTT TAAAAAATTA CAAAAGAAAG AACTGGTTTA CAAAATACTC
GACCAACAAG CTCTAAATCC ATCCATTGCA ACAGCCGTAA GAAAAGAAGT ATCAACCGCT
TCTACTTTTT CAACACCAGC AGAAACAACA GAATTTTCAG AAGTTACAGA AGAAGAAAAC
CACAATCGCA GTCCACGCGC AAAACGTATT AACGTAAAAG CCGCTGAAAC TGCAGAAGAC
AATACATACA TATCTTCGCC TGCACCTGAA GCTGCTCCCA GACCTGCAAT AGCGGGCAGA
AGAGAACGTC AATCCATTGT ACCGGCAGAA GAAGTTCCGC TTGAGCGTGC ACCAAGATCT
TATTCAGAAG AACGGCCTGC ACGCAGCAAT TTTGAAGAAC GTGCACCAAG AACTAATTAT
GAAGAGCGCC AGCCGCGTTC ATATGAAGAA CGTCCGTCGC GTGTTTCTGA AGACAGAGAA
CCAAGATCAG AATCAGCTGA ACGTCCGATG AGACAGACAG CAAACCAGCA ATATTCTGTA
AAAGAATTTG ATGGTGTTAT TGTTAACTCA GGTGTATTGG AAATCATTTC TGAAGGATAT
GGTTTTTTAC GTTCTCCGGA TTACAACTTC ATGGCTAGCC CGGATGATAT CTATGTTTCA
CCTTCTCAGA TCAAATTATT CGGTTTGAAA ACAGGTGATA CAATTGTTGG CCAGATCCGC
CCTCCAAAAG AAGGTGAAAA ATATTTCGCT TTATTAAAAG TTGATACCGT AAACGGAAAA
ACAACGGAGC AGATCCGTGA CCGTATACCG TTTGAGTTCT TAACACCGAT TTTTCCTCAG
GAACGTTTAA ACTTGTCTAC TACGCATAAT CAATTGTCTA CACGTATCCT GGATATGTTC
GCACCGATTG GTAAAGGGCA GCGCGGCATG ATCGTGGCAC AGCCTAAGAC AGGTAAAACG
GTTTTGTTAA AGGAAATTGC AAATGCTATT GCAGCAAATC ATCCTGAAGT TCATTTAATT
ATTTTATTGA TCGACGAACG TCCGGAAGAA GTTACTGATA TCGCACGTAG TGTTAAAGCA
GAAGTTATTT CGTCTACATT TGATGAACAA GCTGATCGCC ACGTAAAGGT TGCCAGCATG
GTGCTTGAAA AAGCAAAACG TATGGTTGAA TGTGGTCACG ATGTAGTTGT TTTGTTAGAT
TCAATTACGC GTTTAGCCAG AGCCTATAAT ACCGTAGTTC CTTCATCCGG TAAAATACTT
TCAGGTGGTG TAGATGCCAA TGCCTTACAC AAACCGAAAA AATTCTTCGG TGCAGCACGT
AACGTTGAAA ACGGCGGCTC TCTAACCATC ATCGCTACAG CATTGATCGA AACAGGTTCT
AAAATGGACG AAGTTATCTT TGAAGAATTC AAAGGTACAG GTAACATGGA ACTTCAATTG
GATCGTAAAC TGGCAAACAA ACGTATTTAT CCTGCTATTG ATGTACCTGC ATCCGGTACA
CGCAGAGAAG ACTTATTGAT TGATAAAGAT GCGCTTTCCC GTATCTGGAT CCTGCGTAAA
TACATGTCTG ATATGAACTC GATCGAAGCG ATGGATTTCT TAATCGACAG AATGTCTAAA
ACGAAAAACA ACGATGAGTT TTTGATCTCC ATGAATGGGT AA
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| Protein sequence | MYNIEELDLK LLSELRVIAE KMNVPNFKKL QKKELVYKIL DQQALNPSIA TAVRKEVSTA
STFSTPAETT EFSEVTEEEN HNRSPRAKRI NVKAAETAED NTYISSPAPE AAPRPAIAGR
RERQSIVPAE EVPLERAPRS YSEERPARSN FEERAPRTNY EERQPRSYEE RPSRVSEDRE
PRSESAERPM RQTANQQYSV KEFDGVIVNS GVLEIISEGY GFLRSPDYNF MASPDDIYVS
PSQIKLFGLK TGDTIVGQIR PPKEGEKYFA LLKVDTVNGK TTEQIRDRIP FEFLTPIFPQ
ERLNLSTTHN QLSTRILDMF APIGKGQRGM IVAQPKTGKT VLLKEIANAI AANHPEVHLI
ILLIDERPEE VTDIARSVKA EVISSTFDEQ ADRHVKVASM VLEKAKRMVE CGHDVVVLLD
SITRLARAYN TVVPSSGKIL SGGVDANALH KPKKFFGAAR NVENGGSLTI IATALIETGS
KMDEVIFEEF KGTGNMELQL DRKLANKRIY PAIDVPASGT RREDLLIDKD ALSRIWILRK
YMSDMNSIEA MDFLIDRMSK TKNNDEFLIS MNG
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