Gene CHU_3560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3560 
Symbol 
ID4184397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4109687 
End bp4110748 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content38% 
IMG OID638073547 
Producthypothetical protein 
Protein accessionYP_680136 
Protein GI110639926 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.448411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTAGCTA CCGGATGCAT TAAAAACCGA ATATTTTTAG ACGTGTCGGT TTATCTGGTT 
ATTTTTGTTC CCTTCAATAC TTCATGTATG CGCAACGAAT TTAAAAGCCT GCTGAAAGAC
ACCATAAAGT CTGCAGTAGG TTTATATAAA ATAATGATAC CCATTTCGAT TATTGTAAAA
TTGCTGCAAT ATTTTGGCTT CATTGCCATT TTGGGAGAAG TACTTGCACC TGTAATGAAA
TTGGTTGGTT TACCCGGCGC ATGCGGCATT GTTTGGGCTA CAACTATGGT TACCAATATT
TATGGCGGCA TGATGACCTT CTACTCATTG CCCGTTTTAT CAACACTAAG CACCGCCCAG
GTTTCTGTTT TATGCAGCCT TATGTTAATG GCACATGCAC TCCCGATTGA ATTGCAGGTT
GCCAGAAAAG CCGGATGCCG CCTGGCTATT ATGTTTTTAA TCCGATTTGG TTTTGGTATC
GTAACCGGAA TACTGATGTT TCAGTTGCTG CAATTGACCG GTTTGTTGCA GGAACAAAAC
GTAGTGCAAT GGCAGCCGGA AACAATTGAA AATCCTACGC TGCTGGCATG GCTGTCAGGT
GAATTGAAAA AATACATCAT TGTATTTTTT GTTGTAATGG CATTGTTGTT TGTTATGCGG
ATATTAAAAA AATCTGGCGC GCTGGATTGG TTCAGCGAAG CATTGAAACC TGTCTTAGGT
ATAATGGGTA TTAACAAGGA AGTAATACCA ATGACCGTAA TTGGTTTGAG TCTTGGAATT
TTATATGGAG GAGCGCTGAT TATAAAAGAG ACCGAAGAAA AAAACATTCC TAAAACAGAT
ATCTTTTATT CATTTGTATT AATGGGTCTT TGTCACAGTT TGATTGAAGA TTCATTGCTT
ATGATTTCAA TGGGTGCGCA CTGGAGCATG ATCTTTATTT TCAGAATGCT TTTTGCACTG
ACTGTTACGT ACTTGCTGGT TAAAGTAACA AAATTGTTCG CATCCAAACA TATAGAAAGA
ATAGCAATGA TTAAAAAGCA GAAAACAAGT AAAGAGCTAT AA
 
Protein sequence
MLATGCIKNR IFLDVSVYLV IFVPFNTSCM RNEFKSLLKD TIKSAVGLYK IMIPISIIVK 
LLQYFGFIAI LGEVLAPVMK LVGLPGACGI VWATTMVTNI YGGMMTFYSL PVLSTLSTAQ
VSVLCSLMLM AHALPIELQV ARKAGCRLAI MFLIRFGFGI VTGILMFQLL QLTGLLQEQN
VVQWQPETIE NPTLLAWLSG ELKKYIIVFF VVMALLFVMR ILKKSGALDW FSEALKPVLG
IMGINKEVIP MTVIGLSLGI LYGGALIIKE TEEKNIPKTD IFYSFVLMGL CHSLIEDSLL
MISMGAHWSM IFIFRMLFAL TVTYLLVKVT KLFASKHIER IAMIKKQKTS KEL