Gene CHU_3419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3419 
Symbol 
ID4186292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3897491 
End bp3898510 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content36% 
IMG OID638073409 
Productendonuclease/exonuclease/phosphatase family protein 
Protein accessionYP_679998 
Protein GI110639788 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTAG GTTTGTTTTA TATGCCTGAA GTATCACCCC GAGACTTTTG GTACAGCAGC 
TTTCTTGCCT TAGGTATTCC GGCAGGAATT GTGCTGATTG CAATAGTGCT GATTTACTGG
ATCGTAAAAA AAAATATTTT ATTTCTCGTT CCCCTGGTGT TATTACTAAT TAACTGGAAG
TACATAGAAC GCACCGTTAC CTTTTCCGGA TCGGAAGAAC AGCAGGCTGA ATTATCGGTT
TTGTCCTATA ATATCCGGCT GTTTAATGTG TATCCGCAAT ACGCAGACAA AACATTTTCT
TCCTCCAGGA AAATAATTGA TTTTATTAAA AAATCGGAAG CGGATGTACT TTGTTTGCAG
GAATTTTATA ATGATCCGAA AGATACATTG TTCAATACGA TTCACCGGAT ACGAAAAAAA
TATAAGTATT ATTATTTTAG TGAAACATAT AAAAACCGTG CAGGCGCTTC TTTCGGAATG
ATCATATTCA GTAAATACCC GATTAAGAAC AGGGGTAAAG TGGTTTTCCA TGAACGTTCA
AACAACCAAA CCATTTATGC AGATGTGCTG CTGCCAAATA AAACAGTACG CATATACAAC
ATGCATCTTC AGTCCATGAG TATTAATGAC AAGGAAATTG CAGAAAGTAA TTTTGATACC
AAGTCGAAGA CAAATGTATT AAATGCATTT ACTAAATTTA AAAAAGGAAC TATTAACCGC
AGCATTCAGG TTGATACGCT TGTTGGTCAC ATAAAAGCAT CACCTTATAA GGTTATTGTA
TGCGGTGACC TGAATGACCC TCCTTACAGC TATACCTATG AGACGTTATC GGATCAATTG
AATAATGCGT TTGAAGAAAA AGGAAACGGA CTGGGAATAA CATTTAATGG CCGGCTTCCT
TTTTTACGGA TTGATCAGCA GTTTTGTGAT CAGGATATTG AAGTGATACG TTTTGAAACA
CAGCATAATA TAACGTATAC CGACCATTTC CCGGTTAAAG CAGGGTATGT GTTTAAATAA
 
Protein sequence
MSLGLFYMPE VSPRDFWYSS FLALGIPAGI VLIAIVLIYW IVKKNILFLV PLVLLLINWK 
YIERTVTFSG SEEQQAELSV LSYNIRLFNV YPQYADKTFS SSRKIIDFIK KSEADVLCLQ
EFYNDPKDTL FNTIHRIRKK YKYYYFSETY KNRAGASFGM IIFSKYPIKN RGKVVFHERS
NNQTIYADVL LPNKTVRIYN MHLQSMSIND KEIAESNFDT KSKTNVLNAF TKFKKGTINR
SIQVDTLVGH IKASPYKVIV CGDLNDPPYS YTYETLSDQL NNAFEEKGNG LGITFNGRLP
FLRIDQQFCD QDIEVIRFET QHNITYTDHF PVKAGYVFK