| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3374 |
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| Symbol | tdcF |
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| ID | 4187163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3856410 |
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| End bp | 3856790 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638073364 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_679953 |
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| Protein GI | 110639743 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.066634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAAAGA AAATAATTAA TACTTCAAAT GCGCCGGCAC CTATTGGTCC GTACAGCCAG
GCAATATTAG CCGGAAATAC GTTATATGTT TCAGGACAAG TAGCATTTGA TCCGGCATCC
GGTAATTTAA TTACGGATTC CATTCAAAAT GAAACACACC GTGTGATGAA AAATATTGAA
GCCATCTTAC TTGAAGCTGG CTATAGTTTC TCTGATATTG TGAAGTGTTC CATTTTTGTA
AAAGACCTTA ATAATTTTGC TGCCATTAAC GAAGTGTATG GTACATATGT AGGTGATGGA
AAGCCTGCCC GTGAAACAGT AGAAGTTGCC CGTTTGCCAA GAGATGTAAA TGTGGAGATC
AGCTGTATAG CGGTTAAATA A
|
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| Protein sequence | MTKKIINTSN APAPIGPYSQ AILAGNTLYV SGQVAFDPAS GNLITDSIQN ETHRVMKNIE
AILLEAGYSF SDIVKCSIFV KDLNNFAAIN EVYGTYVGDG KPARETVEVA RLPRDVNVEI
SCIAVK
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