Gene CHU_3149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3149 
SymbolrpsN 
ID4183627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3592180 
End bp3592449 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content39% 
IMG OID638073137 
ProductSSU ribosomal protein S14P 
Protein accessionYP_679731 
Protein GI110639522 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0199] Ribosomal protein S14 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.457334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.581688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAG AATCGGTAAA AGCTAGAGAA AGAAAAAAGC AGGCAACAGT TGAAAGATTT 
GCTGCTAAAA GAAAAGCTCT AAAAGAAGCA GGTGATTATG TAGGTTTAGA TAAACTACCT
AAAAATGCTT CTCCAGTACG TTTGCACAAT CGTTGTAAGT TGACTGGTCG TCCAAGAGGT
TACATGAGAA AATTCGGTAT CAACCGTGTT ACTTTCAGAG AACTTGCTGC AAATGGTAAA
ATTCCAGGTG TAACCAGAGC CAGTTGGTAA
 
Protein sequence
MAKESVKARE RKKQATVERF AAKRKALKEA GDYVGLDKLP KNASPVRLHN RCKLTGRPRG 
YMRKFGINRV TFRELAANGK IPGVTRASW