Gene CHU_3105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3105 
Symbol 
ID4186555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3543902 
End bp3546265 
Gene Length2364 bp 
Protein Length787 aa 
Translation table11 
GC content43% 
IMG OID638073093 
Producthypothetical protein 
Protein accessionYP_679687 
Protein GI110639478 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.667845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATA CATTAACTTT TTGGGCAAAG CGCTGCGCGC TGATGCTCTT ACTTTCGCTC 
AGCGCAGCCT TTGTTAAAGC GCAGGCACCC ATTGTTGTAG AGCAGGGATT TGGACCTGCT
ACAGTTGTAA TCACTGCAAC TACAGGATCA AGCGATGCAT GTATTACTTA TGCCAATCCA
ACAGATCAAA GCAACAATAT CGGGCAGAAT AAAACATTTT CAATTGCAAG TATTACTGGA
CTAAGTGGTA GTATCACATA CAGCTGGTCG ATTGAAGGCG GTGCAACCAT TGTAGGTTCC
ACAACCGGTA CAAGTGTAAC TGTTAAGCCG ACCATTCAGA CCAATCGCTT TAATAAAGCA
CGTTTGTATC TTAACTATAC GGGTACAAAA AAGGAAAGTG TACCCAATCC TTGTCCACCA
TATACGGGTA ATATCGATGT AGATGTAGCT ACAGCCGGCC AGGTATTTGT AGATCTGTAC
CAGAAGTTTG AGTACATTGA TCCGATTGTA GGCGAAGCGT GTATTGAAAA AGACAAAACC
TACGCCTTCT CTATACGGGA TATGGTAAGC GGTAATATTA ATCTGGGAAT CGGTACAGAT
ATTTATACAT GGAATACAAC TAGTATAGAC CTAGTTGGAA ATCAGCCGTA CGCTTCTGGA
GATAACAGCG CGATCGCATT TGACTTTACT TCTAGTATTA ATGGCGGTGA GCAGATCTTT
GTGCAGGTAG GAAAATGTAA CAGTACTTCC ATTGCCCATA CTTTTGGGAA AAATCTGCCC
GTTGCTGAAT ATGAAATAGA TAATTATCTA GCTGGTTGCA TTCCTACATC GGTAGGACAG
ATTCATATTA CTAATTCGAT GAAAACAGGC ATTGTTTACC GCTGGGAACT AGGTAACAGC
AATTATACCT TTGCAAGCGG TTCTAACACA AACAGCCAGG ATGGTATTAC AGTAAACATC
GGAACAGAAG GCGGTACTAT TTACTTATAT TCGAAAGCAG ATCCGGCTGG AAGTGATTAT
TGCACCAGTG CTGCATCCGG TGAAATTGTA GAGGTTATAC AGATCAAACG TAGCCTGGAT
GAAGGAGTTA CTTTAAGTGG ACCAACCTGT GTACATCCCG GCACCTACAA TTATGCCTTA
ACACCGAATG TAAATACCCC GTTGAACTGG GAACTGCCCT ACGGCTGGAC CATCGACGGA
GCCAACCAGA ATGCGTCTAA CGTGAGCATT ACGGTAGCGG AGGATGCAGA CTTTGGTGTT
ATATCAATTT CTACTACTAC GTGTCCGGGT GATGAAATTG ATGTAAACGT ATATGTGCGT
CCGGATGAGT TAGGAGAAAT TTCTACCGCA AATGTATGTC TTACAAACGG CAGCACGGCG
GAAGTTGTAT TCAGCGTAGA TGAAGTAAAC CATACAACAG GATATGTATG GACCTTACCG
GCAGGCTGGA ATTTTAAATC CGGTACAGCT ACAGATGCTG CAGAGATTAC AGTTATTCCC
AACGGCACCA ATGGCGGAAC GGTAAGCGTG TACGCGCAAG GTAATTGTGC CAACAGCAAT
ACGGCTTCCA TTGAAATAAA ACTCACACCT ACTACTCCGG GTACCATTGC ACGTGATCCT
TCCGGCTGTA TCAATAAAGG CCTGGAAGAT GTTGTAACCT TTACGGTGAC AAATGATCCC
AATGCGACTT CATATACATG GGATTTAGGC GGCTCCGGTA CAGGCAGCTC AACAGCTAAT
TCTATCGTGG TTACTACATC CGGTACCGGC GGACCATACG TGGTGAAAGT ACGTGCGAAT
AATTCGTGCG GAAGCAGTGC AGACCGCACA AGTGTAGTTT CTTTTGCGGG TAATGGAACG
GTTAATATTA CACGTACCGA TCTAATTATC GGCGGTACCA AAATAGGTGA AAAACTGGAA
GCAGACATCG TAGCATCTTC TACCTATCAG TGGTTTAGAG ACGGCGTATT TATTACCAAT
GGCAGAGCCA TTGATATTTT TGATCCGGAA GATCCAACAC CGCATGATTA CTGTGTAGTA
GTAACAAGTA ATACCAGCGG CTGTATTACA AGAACATGTA TACAATCGGG TTACAACTTT
CGCGTGGGAT CAAGTGATGA GGCAAATGCT AAAGTAACCG TGTACCCAAA CCCTGCAGCA
AATAATGTCA ATGTAGGTAT TACCAATACC TTTAAATCGG CATCGATTAC TGTTTATGCA
CTCAATGGTG CGGTTGTATA TAAATCTGCT ACAAGTAACG TGATTACGCC TGTAGATTTA
TCTCAGCTCG AAAATGGGAT GTATTTTGTA GCTGTAGACG TGGATGGTGA TAAAACCATG
CACAAGGTGC AGGTAACGAA ATAA
 
Protein sequence
MKHTLTFWAK RCALMLLLSL SAAFVKAQAP IVVEQGFGPA TVVITATTGS SDACITYANP 
TDQSNNIGQN KTFSIASITG LSGSITYSWS IEGGATIVGS TTGTSVTVKP TIQTNRFNKA
RLYLNYTGTK KESVPNPCPP YTGNIDVDVA TAGQVFVDLY QKFEYIDPIV GEACIEKDKT
YAFSIRDMVS GNINLGIGTD IYTWNTTSID LVGNQPYASG DNSAIAFDFT SSINGGEQIF
VQVGKCNSTS IAHTFGKNLP VAEYEIDNYL AGCIPTSVGQ IHITNSMKTG IVYRWELGNS
NYTFASGSNT NSQDGITVNI GTEGGTIYLY SKADPAGSDY CTSAASGEIV EVIQIKRSLD
EGVTLSGPTC VHPGTYNYAL TPNVNTPLNW ELPYGWTIDG ANQNASNVSI TVAEDADFGV
ISISTTTCPG DEIDVNVYVR PDELGEISTA NVCLTNGSTA EVVFSVDEVN HTTGYVWTLP
AGWNFKSGTA TDAAEITVIP NGTNGGTVSV YAQGNCANSN TASIEIKLTP TTPGTIARDP
SGCINKGLED VVTFTVTNDP NATSYTWDLG GSGTGSSTAN SIVVTTSGTG GPYVVKVRAN
NSCGSSADRT SVVSFAGNGT VNITRTDLII GGTKIGEKLE ADIVASSTYQ WFRDGVFITN
GRAIDIFDPE DPTPHDYCVV VTSNTSGCIT RTCIQSGYNF RVGSSDEANA KVTVYPNPAA
NNVNVGITNT FKSASITVYA LNGAVVYKSA TSNVITPVDL SQLENGMYFV AVDVDGDKTM
HKVQVTK