Gene CHU_3103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3103 
Symbol 
ID4186553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3541883 
End bp3543649 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content45% 
IMG OID638073091 
Producthypothetical protein 
Protein accessionYP_679685 
Protein GI110639476 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.655604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA TCCTCATGCT GTTAACCGTT ATTTTTATGT TCACCCATGC CGCCTTTGCG 
CAGCACTGGT CTACCGCAAC GTTGAATGAA GGAAAAAACA ACATGAGTAC AGGGGCAATC
GGCCCCTATC TATTCTTTTT TTCAGGAGAT AAATGGGTTG GTAACACATT GTATTTAGTG
AGTCAGATAG AAATGATTGA TACACGTACC GGTGCAAAAC TAAGTACTGC CTTACCCAAT
GATTCCATGC GATCCAGGGT TACATCCATA AGTTATGGCA GCAAAATTTA TTTTGCCGGT
GGCGTTGGCA GATTGAATGG CCCCAGTCAA TTAAACCCGT CTTTTTACAG TAAGAAGGTA
GATATCTATG ATACCCTTAC GGGCCAATGG TCTGCACAAT ACCTCTCAGA GGCCCGGGTT
GATCTAGGAG CTGGTGCTGC CAATGGAAAA GTAGTATTCG GAGGGGGAGA GAAAAAAACA
AGCAGTACGG CACCATCATA CATTGTCGAT TTCTATTCTA CGCAAACAAA TACCTGGACA
GCAGGAACAT TTTTGCCTGC ACAAGGAATT GTACAACGCA CCAGGCTTAC AGGAGTTTCT
TTTCAGAACA AAATCTATTT TGCCGGGGGA GAAACCAGCT CAGTTCCCAA AGATTTAATC
AATGTGTATG ACACGGAACT AAATACATGG AGACGTGATA CACTCAAAGA AGCAAAATAC
AACCTGAAAA GTTTTGTATA CAAAGATGCT ATTTATTTTG CGGGCGGGCA GGTGAGCAAT
CTAATTCCAG CTGATACGAT AGAAATTTAC CGTCCGGCAA ACGACAGCTG GGAGTACGTA
AAAATTCCCT ATTTTTTTAA AACCGTGCAG GATGGACGGG AACGGATTTA CAAGGAGGTT
GTACAGGCCG GCTGCAAAGC ATTTTTTATT CCATTTCCAG ATCGTTCGGG TTGGATTCCC
AACAAGCCGG AATTCAGCAG TGCAGACTCG GTAGCGGTCT ATGACCTGGC CCGTAAAAAA
TGGTCCTACA TTGATCTTCC GTCTAAAAAT ATCGGTGTAA CCGCTGTTGC CACACAGAAC
AAAGTATATT TTGCCGGCGG GGCAGATTCA GCAACGGCCG TATTTTCAAA CATCATCGAC
ATCCTCACCC TTGAGCCCAA ACTGCAGCTG GCTGTAGCAA ACACGGCTGT AACAGCGTAT
GATTTCGGCA TGGTAGAAAC GGGTGATCTT TCAACCGTCA GCGTAGCGGT AAGCAACGAA
GGCGATTACG ATTTACTGTT TAAAGATCTT ACCCAACGCA TCAGCATCAG CGGCGATGCA
GCTGATTTCA GCATTGATCA CGGTATGCTG CAACTAACCG ACACCCTGGA GCCCGCGGAG
ATCATTGCAT TACCTGTGAG CTTTCACCCA ACCACAACAG GAACCAAACA AATCACCCTT
ACAATAAACA GCAATGACCC CAATACACCC GCCTATACGC TAACGGTAAC AGGTACCGCA
ACCGATATTC CAACATCCAT TCTGAATCGA TCCGAACAAA ATATTGCCGT GTACCCCAAT
CCAACCACCG GCATTTTGCA CATTGATTCG CAACAACCAG GTACGTTAAA CGTGCAGGTA
ACAAATCTTC AGGGGCAGAC CGTAAAAAAA CAAACCTTGA CCGATGACAC GGCTGGCCTT
GATATATCTG CCCTTCCGGA TGGGTTTTAT GTAGTAAAAA TTACAGGCGA TCAATCATCG
GCTGTTGTGA AAGTATTGAA GCAGTAG
 
Protein sequence
MKKILMLLTV IFMFTHAAFA QHWSTATLNE GKNNMSTGAI GPYLFFFSGD KWVGNTLYLV 
SQIEMIDTRT GAKLSTALPN DSMRSRVTSI SYGSKIYFAG GVGRLNGPSQ LNPSFYSKKV
DIYDTLTGQW SAQYLSEARV DLGAGAANGK VVFGGGEKKT SSTAPSYIVD FYSTQTNTWT
AGTFLPAQGI VQRTRLTGVS FQNKIYFAGG ETSSVPKDLI NVYDTELNTW RRDTLKEAKY
NLKSFVYKDA IYFAGGQVSN LIPADTIEIY RPANDSWEYV KIPYFFKTVQ DGRERIYKEV
VQAGCKAFFI PFPDRSGWIP NKPEFSSADS VAVYDLARKK WSYIDLPSKN IGVTAVATQN
KVYFAGGADS ATAVFSNIID ILTLEPKLQL AVANTAVTAY DFGMVETGDL STVSVAVSNE
GDYDLLFKDL TQRISISGDA ADFSIDHGML QLTDTLEPAE IIALPVSFHP TTTGTKQITL
TINSNDPNTP AYTLTVTGTA TDIPTSILNR SEQNIAVYPN PTTGILHIDS QQPGTLNVQV
TNLQGQTVKK QTLTDDTAGL DISALPDGFY VVKITGDQSS AVVKVLKQ