Gene CHU_3045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3045 
SymbolrecA 
ID4183428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3487668 
End bp3488735 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content40% 
IMG OID638073034 
Productrecombinase A 
Protein accessionYP_679628 
Protein GI110639419 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.398232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.28908 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAA GCACTAGTAC ACCAAATCCA CAAAATGAAA AGTTAAAAGC TTTACAGCTT 
ACCATTGATA AGTTAGAAAA AACCTATGGT AAAGGTACTG TAATGAAATT AAGCGATGAA
GTTGTAATGG ACGTTCCTGT CATTTCAACA GGTTCGCTAG GACTTGACAT TGCTTTAGGG
ATCGGGGGAT TACCTAAAGG AAGAATTGTA GAGATCTATG GACCGGAATC TTCCGGTAAA
ACCACACTTT CTATGCATTG CATTGCAGAA GCACAAAAAG CCGGTGGTAT TGCAGCCTTT
ATAGATGCGG AGCACGCCTT TGATAAAACG TACGCAGAAA AACTTGGTAT TGATACAACA
AACTTATTGA TCTCTCAGCC GGATAATGGT GAGCAGGCAT TAGAAATTGC GGAACATTTG
ATCCGTTCCG GAGCGATTGA CATTATTGTG ATTGACTCTG TTGCAGCCTT AGTACCAAAA
GCAGAGATCG AAGGTGAAAT GGGTGACAGT AAAATGGGTT TACAGGCACG TTTAATGTCA
CAAGCCTTAC GTAAATTAAC CGGAGCGATT AACAAAACAG GCTGTTGCTG TATATTCATC
AACCAGCTAC GAGAAAAAAT TGGTGTAATG TTCGGTAACC CTGAAACTAC TACAGGTGGT
AACGCGTTGA AATTTTATGC ATCCGTACGT TTAGATATCC GCCGTATCGG GCAGATTAAA
GAAAGTGCTG ACAATATTAC AGGTAACCGT ACAAAGGTTA AAGTAGTAAA AAATAAAATG
GCGCCTCCGT TTAAAGTGAT TGAGTTTGAT ATCATGTATG GCGAAGGAAT TTCTAAAATA
GGTGAGATCA TTGATCTTGG TGTTGAATTA GGTATCATCA ACAAAGCCGG TTCATGGTTC
TCTTATGAAG GCACAAAATT AGGTCAGGGA AGAGATGCTG TACGTACAGT GTTCCTTGAC
AATCCTGAAA TGCAGGATGA AATTGAATTA AAAATTCGTC AGAAAGTACA GTTAAGCGGA
GTTCCCGCAG CCATGGAAGC GAAAGAGCTC GAAGAGGAAG AAGCATAA
 
Protein sequence
MSKSTSTPNP QNEKLKALQL TIDKLEKTYG KGTVMKLSDE VVMDVPVIST GSLGLDIALG 
IGGLPKGRIV EIYGPESSGK TTLSMHCIAE AQKAGGIAAF IDAEHAFDKT YAEKLGIDTT
NLLISQPDNG EQALEIAEHL IRSGAIDIIV IDSVAALVPK AEIEGEMGDS KMGLQARLMS
QALRKLTGAI NKTGCCCIFI NQLREKIGVM FGNPETTTGG NALKFYASVR LDIRRIGQIK
ESADNITGNR TKVKVVKNKM APPFKVIEFD IMYGEGISKI GEIIDLGVEL GIINKAGSWF
SYEGTKLGQG RDAVRTVFLD NPEMQDEIEL KIRQKVQLSG VPAAMEAKEL EEEEA