Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2435 |
Symbol | valS |
ID | 4186564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2797021 |
End bp | 2799663 |
Gene Length | 2643 bp |
Protein Length | 880 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638072430 |
Product | valyl-tRNA synthetase |
Protein accession | YP_679033 |
Protein GI | 110638824 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAA TCCGTAAAAC ATATTCCCCG GTTGAAGTAG AAACAAAATG GTACTCCTAT TGGCTTGAAA ATAAATTCTT TCATTCAGCT CCGCATGTCA ATAAAAAACC ATTTACCATT GTCATTCCTC CTCCAAACGT AACGGGAGTT TTACACATGG GTCACATGCT GAATAATACC ATCCAGGATG TGTTGATCCG GAAGGCACGT ATGGAAGGCA AAGAAAGCTG CTGGGTACCT GGTACGGACC ACGCTTCTAT TGCTACAGAA GCAAAAGTGG TTGCTTTGCT GCGTGAACAG GGCATAAAAA AAAGCGACCT GTCTAGGGAT AAATTTTTAG AACATGCCTG GGCATGGAAG GATAAATACG GCGGAATCAT ACTTGAACAG TTGAAAAAAC TGGGTGCTTC CTGTGACTGG GACAGAACAC GTTTCACCAT GGAAGACAAT CTTTCAGATG CCGTTATTGA AGTGTTCAAT AAACTCTACG CAGATGGCAT GATCTACCGT GGATTCCGTA TGGTTAACTG GGATCCGGAA GGTAAAACAG CGTTATCGGA TGAAGAAGTG ATTCACAAAG AAGTTCAGTC CAAATTATAT TATATCAGAT ACCAGGTTGT TGGTTCGGAT GACTATGCGC TTGTAGCAAC GACACGCCCT GAAACCATTC TTGGTGATAC TGCCGTGTGT ATCCACCCGA AAGATGAACG CTGGAAACAC TTAAAAGGGA AAAAAGTTAT TGTTCCGCTG ATCAATAAAG AAATACCAAT CATTGAAGAT GAATACGTAG ATCTTGAATT CGGAACAGGC TGCCTTAAGG TAACACCGGC CCACGATGTA AACGATTATC AGCTGGGACA GAAACATGGG CTGGAAGTGA TCGACATTAT GAATGACGAT GGTACATTCA ATGAGAAGGC TCAGTTATAC GTTGGCCTGG ACCGTTTCAA AGTTCGCAAA CAACTTTCTG CTGAACTGGA AGAAAAAGGT TTTTTAACCA AAACAGATAA CATTACAAAC AACGTTGGTT ATTCTGAACG TACCAATGCT GTTGTTGAAC CACGCCTTTC CTTACAGTGG TTCGTAAATA TGCGTAGCTT CATGGATAAA CATCCGGAAG TGTTGAGTTC AGTAATGAAC GATGAAATAA AATTACATCC TGCGAAGTTT AAAAATACGT ACAAACACTG GATCGACAAT ATTAAAGATT GGTGTATCTC CCGTCAATTG TGGTGGGGAC AGCGTATACC TGCCTGGTAT TTATCCGACG GACAGTATAT TGTTGCGTTG AATGAAACAG AAGCTTTGGC AAAAGCGAAA GCACTTACCA GCAATGCTGC ATTAACCCTT GCTGATTTAA AACAGGACGA AGATGTACTG GATACCTGGT TCTCTTCCTG GTTGTGGCCG ATCTCTGTAT TCGATGGTTT CAAAGATCCC AACAACGAAG ACATCAAGTA CTATTACCCT ACTGACGATC TGGTAACAGC ACCTGAAATT TTATTCTTCT GGGTGGCGCG TATGATTATG GCGGGTTATG CTTTCAGAGG TGAAAAACCT TTCAGCAATG TATACTTAAC CGGTATTGTA CGTGACAAAC AAGGCCGTAA AATGTCTAAG TCGTTAGGTA ACTCTCCTGA CCCGTTAGAT CTGATCACGA AGTATGGTGC AGATGGTGTA CGTTTTGGTA TGCTGTTGAG TTCTCCTGCC GGAAATGATT TATTGTTTGA TGATAAATAT TGTGAACAGG GAAGAAACTT CACAAATAAA CTCTGGAACG CTTTCCGTTT AATAAAAGGC TGGGAAATAG ATAAGAGCTT ACCTTACGTA AACGCGGCTT CGGTTGAATG GCTGAACGCA CGTATCAACG CAAGTTTGGT GGAGATCGAA GATCATTTCA GTAAATACCG TTTATCTGAT GCGCTGATGA GTGTGTACAA ATTGGTTTGG GATGATTTGT GTGCGTGGTA TCTGGAAATG ATCAAGCCCG AGTTCGGTAA GCCAATCGAT GCAAAAACCT ATGAGGAAAC CTTAGCGATT TTTGAAGAGA TATTAAAAAT TGTACATCCG TTTATGCCGT TCATTACCGA AGAATTATGG CATGAAATTA AGGAGCGCAG TGCAACAGAT TGTGTGATTG TTGCAGCGTG GCCAACGGTT AAACCTTATT CTCCGGATGT ATTAACAGGT GGTAATTCCA TCATGGAAAT TGTTACTCAA TTAAGAAACA TCCGTGTTTC CAAGCAACTG GCAAAAGACG TACGTCCTGA ACTCTATATT AAAGCCTCCC AGAATGATAC CTACAAAGCG TTTGATACTG TTATTAAAAA ACTGGGATTA GCTGGAGAAA TAGCTTTTGT TGAACAAAAA GTTGAGGGCT GCGCATCCTT TATTATTAAA AATGACGAAT TCTTTTTCTC TATTCAATCT TCGCAAGTAG ATGTAAATGA AGAGAAAGAA CGTATCCAGA AAGAACTGGA GTATACGAAA GGTTTCTTAG TTTCTGTTGA AAAGAAACTA AATAATGATA AATTCGTACA AAACGCAGCA GCCCACGTGC TTGAAAACGA AAGACAAAAA CAACAGGATG CGCTTTCTAA AATTAAATCC CTGGAAGAAG CATTAAAGGA ACTTGTATCT TAA
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Protein sequence | MSEIRKTYSP VEVETKWYSY WLENKFFHSA PHVNKKPFTI VIPPPNVTGV LHMGHMLNNT IQDVLIRKAR MEGKESCWVP GTDHASIATE AKVVALLREQ GIKKSDLSRD KFLEHAWAWK DKYGGIILEQ LKKLGASCDW DRTRFTMEDN LSDAVIEVFN KLYADGMIYR GFRMVNWDPE GKTALSDEEV IHKEVQSKLY YIRYQVVGSD DYALVATTRP ETILGDTAVC IHPKDERWKH LKGKKVIVPL INKEIPIIED EYVDLEFGTG CLKVTPAHDV NDYQLGQKHG LEVIDIMNDD GTFNEKAQLY VGLDRFKVRK QLSAELEEKG FLTKTDNITN NVGYSERTNA VVEPRLSLQW FVNMRSFMDK HPEVLSSVMN DEIKLHPAKF KNTYKHWIDN IKDWCISRQL WWGQRIPAWY LSDGQYIVAL NETEALAKAK ALTSNAALTL ADLKQDEDVL DTWFSSWLWP ISVFDGFKDP NNEDIKYYYP TDDLVTAPEI LFFWVARMIM AGYAFRGEKP FSNVYLTGIV RDKQGRKMSK SLGNSPDPLD LITKYGADGV RFGMLLSSPA GNDLLFDDKY CEQGRNFTNK LWNAFRLIKG WEIDKSLPYV NAASVEWLNA RINASLVEIE DHFSKYRLSD ALMSVYKLVW DDLCAWYLEM IKPEFGKPID AKTYEETLAI FEEILKIVHP FMPFITEELW HEIKERSATD CVIVAAWPTV KPYSPDVLTG GNSIMEIVTQ LRNIRVSKQL AKDVRPELYI KASQNDTYKA FDTVIKKLGL AGEIAFVEQK VEGCASFIIK NDEFFFSIQS SQVDVNEEKE RIQKELEYTK GFLVSVEKKL NNDKFVQNAA AHVLENERQK QQDALSKIKS LEEALKELVS
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