Gene CHU_2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2054 
Symbol 
ID4186715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2402691 
End bp2403845 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content41% 
IMG OID638072054 
Producthypothetical protein 
Protein accessionYP_678659 
Protein GI110638450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.818637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAG ACGAAATTAT ATACGAATGG ATCGATCGTT ACCTGACCGG ACAACTTATG 
GGAGAAGAAT TATCTGCCTT TACAGAAAAG CTTGCGTCTG ATGCAACATT TTATTTACTC
GTAGAAAATC AAAAAGCGGC GAATACAATT ATTCTGGGCA ACCGGCTTGC CCAGATAAAG
CAACAGATGG ACGCAGACTT CAGATCAAAA GACACCAAAC GTAACCTTAC TAAATGGGGA
ATTAGTGGAT TGCTGGGAAT ATCTGTAGTA ATCTGTACCT TGGTTTATAG ATCGGATATA
CCTGAATCTG AGCCAACGGC GCCACAGCAG ATAAATGATC CGAAGTTCGC TTCGGTCAAC
CGTTCTTCAA AACATACTGA GCACCCAGCA GAAGAAAAAA CGCCGTCATC AAATATACAT
ACAGGCATAT ATCGGCCTGC TGAAACAACT GCTTCCGGCA ATAAAAAATC GTTGCCTGAC
CTGAATCCCA ATGCAGGATT TGATACTAAC CCTACTTCAT ACATACAAAA AACAGGCAGT
ACAAATTTTA ACGAAGCTGT TGCTGAAGAA CAAAAAATAA ACACAAATCA ATTTACAGAT
ACACATCCAG GTAAACCTAA AACGGAACTG TGCCAAGGTG TGACTATAGA AGCCATTCTT
ACCATAGATG CAGCTTGTGC CAATAAGTAT GACGGAGAAA TTCAGATTGC CGAACATACG
GTAAAAGGCG GCCTCGCGCC ATATACCTAT ACACTAATCA ATAAAACAAA CGATACGGTC
AGACAACAAA GTCCATCATT TGTTTCCTTA CACGCTGGTC AATATACCTT GTTTTTCGAA
GATGCAAACA GGTGTCTTTC AGCATATAAA AAACCTTTAT ATGTACATGA AAAATCATGT
ACGGCGCCTG CACAGTCTTT CAGCCCGAGA GCAGGAGAAC GGTTTGAGTA TCCTGTATCC
GGAGACAGCG ACGCGGATAT CACAATCTAC AACCGCGGTG GACAAGCTAT TTATAAAACA
CATCTACAAC GGGGAGTATC TGATTTCTGG GAGGGCACCA ACCAAAACGG ACAATTATTA
TCTGCGGGTG TGTATATTTA CATTATTGAA TACGTATCCG GGATAAAAGA AACCGGTGAA
GTAGTACTAT TCTGA
 
Protein sequence
MKPDEIIYEW IDRYLTGQLM GEELSAFTEK LASDATFYLL VENQKAANTI ILGNRLAQIK 
QQMDADFRSK DTKRNLTKWG ISGLLGISVV ICTLVYRSDI PESEPTAPQQ INDPKFASVN
RSSKHTEHPA EEKTPSSNIH TGIYRPAETT ASGNKKSLPD LNPNAGFDTN PTSYIQKTGS
TNFNEAVAEE QKINTNQFTD THPGKPKTEL CQGVTIEAIL TIDAACANKY DGEIQIAEHT
VKGGLAPYTY TLINKTNDTV RQQSPSFVSL HAGQYTLFFE DANRCLSAYK KPLYVHEKSC
TAPAQSFSPR AGERFEYPVS GDSDADITIY NRGGQAIYKT HLQRGVSDFW EGTNQNGQLL
SAGVYIYIIE YVSGIKETGE VVLF