| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1992 |
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| Symbol | tktA |
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| ID | 4186083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2327065 |
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| End bp | 2329473 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638071995 |
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| Product | transketolase |
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| Protein accession | YP_678600 |
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| Protein GI | 110638391 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.15907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATACAA GTGAAATGAC CGGAGAGTTT TCTTTGACCA AGGAAGAGAT TCTGCAAGAT
TACAGACTGG CCTGTGAAAG CAGACAAACG AGCATTCTTG CCCGTAAGGA GGTTTTTATG
GGTAAAGCCA AGTTTGGTAT TTTTGGAACA GGGAAAGAAC TGGCGCAGAT CTGCATGGCA
AAGTTCTTCA AAGAAGGCGA TTTCCGTTCA GGTTATTACC GGGATCAGAC GTTTGTCATG
GCTACGGGTG AGCTGAGTAT TGAACAGTAT TTTGCTCAGT TATACGGTCA TGCAGATGTC
AATCACGATC CGCATTCCGG CGGACGTATG ATGATCGGTC ATTATTCAAC ACGAAATTTA
GATGAACAGG GTCGTTTTAA AGACCTCACA AAAATAAAAG TATCGACACC CGATATTTCT
CCAACAGGAG CGCAAATGCC CCGTCTGGTA GGTTTAGCCT GGGCTTCCAA GCTGTTTCGC
AACAATCCTG AATTGCAGTC AATGACCAAC TTCAGCCATA ATGGGAATGA AGTTGCATTT
GGTACGATCG GAAACGGCGC CATGGCAGAA GGGGTATTTT TTGAAGCGAT CAATGCCGCA
GGTGTATTGC AGATACCCAT GCTGATCTCA ATCTGGGATG ATGCCTATGC GATCTCTGTA
CCGCAGCGTT ATCAGACAAC CAAAGAAGAC ATCTCTTCTA TGTTTGAAGG TTTCAGAAGA
GACCACAACG AACGTGGTAT TGAGATCATG AAAGTGAAGG GCTGGGATTA TGAAGCGCTT
TGCTATGCAT ATAAAGAAGC TACCCGTTTG TGCAGAGAAG AACATGTACC GGTGCTTATG
CACGTATGTG AAATGACACA GCCCATGGGA CATTCTACAT CGGGTTCACA CGAGCGTTAT
AAAACCAAAG AACGCCTGGA CTGGGAAGAA GAATACGATT GCAACAAGAA GTTCAGAGAA
TGGATTCTGG AGAATGGTGT GTGTACAGAA GATGATCTGT TGAAGATCGA AGCAGAATCG
GTAGAAAAAG TAAAACTTGC GCGTCAGCGT GCCTGGGATA ATTTTGTAAA ATACCTGAAG
GACGATCACG AACTGGCTGT ACAATATATC AAAGAAGCAG CAGCTTCAAG TTCTGTTAAA
GATGAACTTG AACAGCTTTC TGTTGATTTA CACAAAACCT TGAACCCATA CCGCTCGGAT
GCGGTAAGAG CGGTGAAGAA AGCGTTGCGT TTGCTGCGCA ATGAAACAAC TGCTGCCAAA
GAACACTTGC AGGATTGGGC GGCACGTACT GAAACAGAAA ACAGACAACG TTTCAATAGT
CATTTATACA GCCAGTCTGT TGAATCTGCC TTACTGGTGC CTGAAGTGGC GCCGGTTATC
TCAGCCGATG CACCCTTAAT CGATGGAAGA GAATTATTGC AGCACAACTT CGAAGCACTG
TTCAAGCGTG ATGCACGTCT GCTTGCCTTC GGGGAAGACG TAGGGCAGAT CGGTGATGTA
AACCAGGGCT TCTCCGGGTT ACAGGATAAA TTCGGAGAGA TCCGTATTAC CGATACCGGT
ATCCGTGAAG CAACCATCGT TGGACAAGCC ATCGGCACCG CTATGCGTGG CCTGCGTCCG
ATTGCCGAGA TCCAGTATCT AGACTATTTA TTATTCGCTA TTGAAATATT ATCGGATGAT
GTGGCATCGC TGCATTACCG TTCAGCCGGC GGACAGAAAG CACCGCTGAT TATCCGTACA
CGTGGCCACC GGCTGGAAGG CATGTTCCAC TCGGGTTCAC CGATGCAGAT GATCTTAGGT
TCTATCCGTG GCATGTTCTT ATGTGTACCG CGGAACATGA CGCAGGCAGC AGGTATGTAC
AACACACTGA TCAAAGGCGA CGAACCGGCG ATCATGATTG AATCATTAAA TGCGTATCGC
TTGAAAGAAA AGCTTCCGGA GAACCTGGGA GAATTTACCG TGCAGTTGGG TATTGTAGAT
GTATTGAGAC CGGGTACGGA TATTACCATT GTTACATACG GTTCTATGTG CCGTATTGTA
CAGGAAGGCG CAAACGAATT ACAGCAGTTA GGGATCTCGT GTGAGATCAT TGACATACAA
ACGCTGCTGC CGTTTGACAG AACACAGCAG ATTGTTGAAT CGATTAAGAA AACAAACCGT
GTGTTGTTTG CCGATGAAGA CTATTCCGCA GGTGCAACGG CTTATATGAT GCAGCAGGTA
CTGGAAGGGC AGAAGGCATG GCAGTATCTG GACTCAGAGC CACGCACGCT TGCCGCACAG
GATAACAGGC CAGCATACTC TACCGATGGA GATTATTATT CTAAGCCAAG CTCAGATGAT
GTCATTGATG TAGTATATGA AATGATGCAC GAAGTAAATC CGGCGAAGTT TCCGAAGTGG
TATAAGTGA
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| Protein sequence | MNTSEMTGEF SLTKEEILQD YRLACESRQT SILARKEVFM GKAKFGIFGT GKELAQICMA
KFFKEGDFRS GYYRDQTFVM ATGELSIEQY FAQLYGHADV NHDPHSGGRM MIGHYSTRNL
DEQGRFKDLT KIKVSTPDIS PTGAQMPRLV GLAWASKLFR NNPELQSMTN FSHNGNEVAF
GTIGNGAMAE GVFFEAINAA GVLQIPMLIS IWDDAYAISV PQRYQTTKED ISSMFEGFRR
DHNERGIEIM KVKGWDYEAL CYAYKEATRL CREEHVPVLM HVCEMTQPMG HSTSGSHERY
KTKERLDWEE EYDCNKKFRE WILENGVCTE DDLLKIEAES VEKVKLARQR AWDNFVKYLK
DDHELAVQYI KEAAASSSVK DELEQLSVDL HKTLNPYRSD AVRAVKKALR LLRNETTAAK
EHLQDWAART ETENRQRFNS HLYSQSVESA LLVPEVAPVI SADAPLIDGR ELLQHNFEAL
FKRDARLLAF GEDVGQIGDV NQGFSGLQDK FGEIRITDTG IREATIVGQA IGTAMRGLRP
IAEIQYLDYL LFAIEILSDD VASLHYRSAG GQKAPLIIRT RGHRLEGMFH SGSPMQMILG
SIRGMFLCVP RNMTQAAGMY NTLIKGDEPA IMIESLNAYR LKEKLPENLG EFTVQLGIVD
VLRPGTDITI VTYGSMCRIV QEGANELQQL GISCEIIDIQ TLLPFDRTQQ IVESIKKTNR
VLFADEDYSA GATAYMMQQV LEGQKAWQYL DSEPRTLAAQ DNRPAYSTDG DYYSKPSSDD
VIDVVYEMMH EVNPAKFPKW YK
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