| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1657 |
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| Symbol | nlpC |
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| ID | 4183374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1942299 |
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| End bp | 1942859 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638071651 |
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| Product | cell wall-associated hydrolase |
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| Protein accession | YP_678267 |
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| Protein GI | 110638058 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.388437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTTTGA AAGTCATCTC ACTATTCGTT TTTGCAGCTT TATTTTTTGC CGGTTTTACA
ACCGAAATGA ATTCTGATGG ATTTCAGCAA GTGCTTGACA ATACAAGCAA TCCAACAGTT
AAGAATCAGC TGGAACGTTT TCAGAAAGGC GGTATTGAAA AAACCGTTGA CACCTCAGAA
TATTCTGCCA ATGAGGTTAT CGCTTATGCA AAAACATTTA TCGGTACGCC GCACGTAATG
GGAGGTGTAA GTAAAAAAGG AGTAGATTGC TCGGGTCTTA TTATGGTAGC ACATAAACAG
GCTGGGGTTA TATTGCCGCA TTCTTCGCAT GAACAAGGTA GATACGGAAC CGTTATACCC
AATGTAGATT CGCTGAAAAA AGGAGATCTG TTATTTTATT ACAGCTCTTA CAGCAGTAGT
AATTTTATCA CGCATGTGGG AATCTATCTG GGCGACGGCA CCTTTATTCA TGCTTCAAAC
CGCAGCGGTG TGATCATTAC AAATACCTCA GACAGCTACT GGAAGGAAAA ATACCTTTTT
GCTACCCGTT TCAAAAATTA G
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| Protein sequence | MRLKVISLFV FAALFFAGFT TEMNSDGFQQ VLDNTSNPTV KNQLERFQKG GIEKTVDTSE
YSANEVIAYA KTFIGTPHVM GGVSKKGVDC SGLIMVAHKQ AGVILPHSSH EQGRYGTVIP
NVDSLKKGDL LFYYSSYSSS NFITHVGIYL GDGTFIHASN RSGVIITNTS DSYWKEKYLF
ATRFKN
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