Gene CHU_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1583 
Symbol 
ID4185165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1858394 
End bp1858753 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content36% 
IMG OID638071576 
Producthypothetical protein 
Protein accessionYP_678193 
Protein GI110637986 
COG category[S] Function unknown 
COG ID[COG1416] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0253638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.163534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAAA AGTCAGATAC ATATAAAGTA GTCATTCAGC TTTCAAGTAA TGAATTGCTG 
GTTCAAAAAG CAACCATCAG TCAATTGAAT AATATTTTAA ACGCGCTTCC ATCCGTCAGC
ATTGAGCTTG TTATGAATGG ACCTGGAATA GATCTGATTT TAAAAGATGC TTTTTTAATT
AACACACTGG AGCAGCTAAG TGAAAAGGGT ATTCAGTTTA TGGTTTGTAA AAATTCATTG
AACTATAAAA ATATGGATCA CAATTCAATC CTTCCTTTTT GTAAAATAGT CCCTTCTGCC
CTTGCGCATC TGGTCGTAAG GCAGCATGAA GGCTGGAGTT ATATAAAAGC CGGATTTTAA
 
Protein sequence
MGEKSDTYKV VIQLSSNELL VQKATISQLN NILNALPSVS IELVMNGPGI DLILKDAFLI 
NTLEQLSEKG IQFMVCKNSL NYKNMDHNSI LPFCKIVPSA LAHLVVRQHE GWSYIKAGF