| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1528 |
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| Symbol | tpn |
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| ID | 4184506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1782192 |
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| End bp | 1783541 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638071522 |
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| Product | transposase |
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| Protein accession | YP_678139 |
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| Protein GI | 110637932 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0027095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.119648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGTATCCTG GAGATGGCTT AATAAATAAA AGTACGAAAC ATCATTTACT ATCATTAATC
TCTTTTTCTA TGCCTGCTAT CCGCACACGC AGCAAATACG ACACATCTGT TATATATTTA
TATTATCACA ACAAAGAACA TCTTATATCA GAAACGTTGC GTAGATCGAT TCCATATTCT
ACTATTTCCA CCTGGCGAAA TAATGATCCC AGTACTTCTT ATATAGGTTA TGAGATAAGG
CACAAACTCG ACCAAGCCTT TGAACACATG GAGCATATAC ATGAACGTGC TGCACTAAAA
AAAACACTCA ATATTGTTAC CAAAACATGG ATCCGTATTG CACACATCGT TAATCCTTTT
CTTAATAAAC ACAAACAGTA TAAAGATGTC GTCATAAATG AAGTTCAGCA TTTATGTAGG
ATACTACCCA AACGCATTGC TCTAAAGCTT GCAGGAATTT CGTCCAATAC TTTTCACTAC
AGATTAAACA AACTAAAAAA TATCTGTCAC GATTCTGCTT TTGCATTATG TTTTAAAAGA
CATCCGTTAC AATTGTCTTT TAAAGAAATC AGCATCATGA AACAATTGCT CATGGACATA
CGATTTATCT GCTGGCCTGT TTCTTCTATT ACATATTTTG CTAAACGAAA CAAATTACTT
GCTGCATCTT TGAGTACATG GTATAAGTAT GTTCCGCTAC TTGGAGTAAG GAATAAACAA
CAAAAAGAAA AACACGTGCA CACAGGACTT GTCACAACCG CTCCCAATCA GTTTCTGCAT
GTGGATACAA CCTTCTGGAA TATTAAACAC GACGTAAAAG CTGCTATTGT ATTGGTGAGT
GATAATTTTT CAAAAGCGAT TCTGGGATGG AGTGTTTCTT TACAAAAAAA TGCACATAAT
GTAAAGTGCG CACTTGATGC CGCTATACAG ACTATACATC AATATCATCC AGAGCATCCA
TGCACAATAC TCATGGCAGA TGGAGGTACA GAGAATCACA ATATTACCAT TCATGAACTA
CTTAAAAATA CAGTCCAACC TGAGATAACT AAAATCATAG CATTAAAAGA TATTTCCTTT
TCAAACGCCC CTATTGAAGC TATTAACAAA ATCATTAAAG TATATCTTCG GTTTTATCAA
CCAGCTACTT TGTCTCAGCT TATTGAATGT GTAAAGCTTA CGGTGCATGA TTATTCGTTT
GTACGCCCGC ATGGTTCTTT AAACGGAATG GTTCCGATGG AAATCTATAC CAATCAACAG
TTCAATATGG ATACAAAATC GTTTATGGCT GAAGCAAAAA GCAAACGTAT CGAACAAAAT
CGTAATCACA TGTGCCGAAC CTGTAAATAA
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| Protein sequence | MYPGDGLINK STKHHLLSLI SFSMPAIRTR SKYDTSVIYL YYHNKEHLIS ETLRRSIPYS
TISTWRNNDP STSYIGYEIR HKLDQAFEHM EHIHERAALK KTLNIVTKTW IRIAHIVNPF
LNKHKQYKDV VINEVQHLCR ILPKRIALKL AGISSNTFHY RLNKLKNICH DSAFALCFKR
HPLQLSFKEI SIMKQLLMDI RFICWPVSSI TYFAKRNKLL AASLSTWYKY VPLLGVRNKQ
QKEKHVHTGL VTTAPNQFLH VDTTFWNIKH DVKAAIVLVS DNFSKAILGW SVSLQKNAHN
VKCALDAAIQ TIHQYHPEHP CTILMADGGT ENHNITIHEL LKNTVQPEIT KIIALKDISF
SNAPIEAINK IIKVYLRFYQ PATLSQLIEC VKLTVHDYSF VRPHGSLNGM VPMEIYTNQQ
FNMDTKSFMA EAKSKRIEQN RNHMCRTCK
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