Gene CHU_1426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1426 
Symbol 
ID4186223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1653868 
End bp1654296 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content38% 
IMG OID638071419 
Producthypothetical protein 
Protein accessionYP_678037 
Protein GI110637830 
COG category[S] Function unknown 
COG ID[COG5646] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.515265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.103099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTAA ACGAAAAAAA ACCTGAAACG ATAGACGCAT ACATTTCAGT TTTTCCGGAG 
CATACTCAAA AGCTGCTTCA GCAAATGCGG ACAACGATTA AAAAGGCTGC ACCAAAAGCG
GAAGAAGTAA TCAGCTATGG AATGCCGGCA TTTAAACTGC ACAGTGTATT AGTCTATTTT
GCCGGATATA AAAATCACAT TGGCTTCTAC CCTACTCCAT CCGGAATCAA ATTGTTCAGC
GATGAATGCG CAGATTATAA AACGTCTAAA GGTGCTGTAC AATTTCCGCT GGATAAACCA
CTACCGGTTA AACTCATCAA AGAAATTACA CTATTCAGGG TAAAAGAAGA CAAAACAAAC
GCTGCGATAA AAGCAGCAAA AAAAAACACT CCGAAAAAGA AAACAGTTTC TTCAAAAAAG
AAATTATAG
 
Protein sequence
MKVNEKKPET IDAYISVFPE HTQKLLQQMR TTIKKAAPKA EEVISYGMPA FKLHSVLVYF 
AGYKNHIGFY PTPSGIKLFS DECADYKTSK GAVQFPLDKP LPVKLIKEIT LFRVKEDKTN
AAIKAAKKNT PKKKTVSSKK KL