Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1286 |
Symbol | |
ID | 4185985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1500567 |
End bp | 1501145 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638071280 |
Product | copper binding protein, plastocyanin |
Protein accession | YP_677898 |
Protein GI | 110637691 |
COG category | [C] Energy production and conversion |
COG ID | [COG3794] Plastocyanin |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.232717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.839304 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TGTACCTTAT TTTCGTTTTT ATGCTGTCAG CCTTATTTTG TCAGGCAGCA GCCGTTGCTG TTACGATCAG CGGATTTGCT TTTAGTCCAG CACAAACAAC TGTTCAGGTT GGGGATGTTA TTACCTGGAC GAACATGGAT AATACATTGC ATTCCATTGT CTCTACAGCT GTTCCAGCCG GAGCTGCACC ATTTACTTCC GGTACGTTCG GGAAAAATGA AACCTTTACC TACACCGTTA CAGAAGCCGG AGATTATACA TATCAGTGCG GTGTACATAC CAGCATGTTA GGTGCTTTTA CAGCAACCAT AACAACTCCG GTGGTTAAAC CTACATTGAT CTTAGAAGCG TTATATCCAA ATCCTGCAAG TGCGTCTATT CACATAGAGT CTCCGAAGAG CATTAAATCA ATCGACATAT ATTCTGAGAC AGGTGTGCTT GTAAAGACTC TTGCCTTTAC ATCTGCAAGC GTTGATGTGC CGATCGGTGA ATTAAACAAA GGCGCATACC TGCTTCGCAT CACCAGTGAA GACGGTATGT TTGATACCCG CAGAATCATA AAACTGTAA
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Protein sequence | MKKMYLIFVF MLSALFCQAA AVAVTISGFA FSPAQTTVQV GDVITWTNMD NTLHSIVSTA VPAGAAPFTS GTFGKNETFT YTVTEAGDYT YQCGVHTSML GAFTATITTP VVKPTLILEA LYPNPASASI HIESPKSIKS IDIYSETGVL VKTLAFTSAS VDVPIGELNK GAYLLRITSE DGMFDTRRII KL
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