Gene CHU_1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1286 
Symbol 
ID4185985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1500567 
End bp1501145 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content43% 
IMG OID638071280 
Productcopper binding protein, plastocyanin 
Protein accessionYP_677898 
Protein GI110637691 
COG category[C] Energy production and conversion 
COG ID[COG3794] Plastocyanin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.232717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.839304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TGTACCTTAT TTTCGTTTTT ATGCTGTCAG CCTTATTTTG TCAGGCAGCA 
GCCGTTGCTG TTACGATCAG CGGATTTGCT TTTAGTCCAG CACAAACAAC TGTTCAGGTT
GGGGATGTTA TTACCTGGAC GAACATGGAT AATACATTGC ATTCCATTGT CTCTACAGCT
GTTCCAGCCG GAGCTGCACC ATTTACTTCC GGTACGTTCG GGAAAAATGA AACCTTTACC
TACACCGTTA CAGAAGCCGG AGATTATACA TATCAGTGCG GTGTACATAC CAGCATGTTA
GGTGCTTTTA CAGCAACCAT AACAACTCCG GTGGTTAAAC CTACATTGAT CTTAGAAGCG
TTATATCCAA ATCCTGCAAG TGCGTCTATT CACATAGAGT CTCCGAAGAG CATTAAATCA
ATCGACATAT ATTCTGAGAC AGGTGTGCTT GTAAAGACTC TTGCCTTTAC ATCTGCAAGC
GTTGATGTGC CGATCGGTGA ATTAAACAAA GGCGCATACC TGCTTCGCAT CACCAGTGAA
GACGGTATGT TTGATACCCG CAGAATCATA AAACTGTAA
 
Protein sequence
MKKMYLIFVF MLSALFCQAA AVAVTISGFA FSPAQTTVQV GDVITWTNMD NTLHSIVSTA 
VPAGAAPFTS GTFGKNETFT YTVTEAGDYT YQCGVHTSML GAFTATITTP VVKPTLILEA
LYPNPASASI HIESPKSIKS IDIYSETGVL VKTLAFTSAS VDVPIGELNK GAYLLRITSE
DGMFDTRRII KL