Gene CHU_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1260 
SymbolureA 
ID4186952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1470742 
End bp1471488 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content45% 
IMG OID638071254 
Productbifunctional urease subunit gamma/beta 
Protein accessionYP_677872 
Protein GI110637665 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0831] Urea amidohydrolase (urease) gamma subunit
[COG0832] Urea amidohydrolase (urease) beta subunit 
TIGRFAM ID[TIGR00192] urease, beta subunit
[TIGR00193] urease, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.56438 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTTG CACCGAAGGA TATTGAAAAG TTAATGCTGC ACAATGCCGG AGTTCTTGCA 
CAGAAAAGAT ATGCCAGAGG TATTCTGCTA AATTACCCGG AAACCATTGC ACTTTTATCT
GCACAGCTTT TAGAGTTTAT CCGTGAAGGA TACAGTGTTG CTGAGCTGAT GGATCTTGGC
ATGAAGATTC TTGGCGTAGA CGATGTAATG GATGGCGTTG CGCAGATGGT AGACGAAGTA
CAGATAGAAG GTACATTTCC GGATGGTACA AAACTCGTAA CGGTCCATCA TCCTGTCTGT
AATCAAAACC TGTCAAATGG TTATGCCCTG TATGGTTCCG GATTAACAAA GTCAGCATCA
AAACTGCTTA TTGATAATAC GATCAATCCA ACACCAGGTG CAAAAGAATA TGCCGCCGGT
ACGATCGAAT TGAACGCAGG CAGAAAAACG AAAATACTTG ATGTGATTAA CTCCGGCGAC
AGGCCGGTAC AGGTTGGTTC ACATTATATT TTTTCAGAAA CAAATGCGGC GCTGAAGTTT
GACCGTGTCG GAGCAATCGG CTACCGACTT GATATACCGG CAGGCACAGC GGTACGCTTT
GAACCGGGTG AGAAGAAAAC GGTGCAGGTA GTTGAGATTG CCGGGCAGCA AATCGTATAC
GGAGGAAATG GGTTGATCGA TGGCGGTATC ACAGAAGATG ATATTCCGCA GATCAAGCAG
CGCATGCAGG AAAAAGGATT TATTTAA
 
Protein sequence
MRLAPKDIEK LMLHNAGVLA QKRYARGILL NYPETIALLS AQLLEFIREG YSVAELMDLG 
MKILGVDDVM DGVAQMVDEV QIEGTFPDGT KLVTVHHPVC NQNLSNGYAL YGSGLTKSAS
KLLIDNTINP TPGAKEYAAG TIELNAGRKT KILDVINSGD RPVQVGSHYI FSETNAALKF
DRVGAIGYRL DIPAGTAVRF EPGEKKTVQV VEIAGQQIVY GGNGLIDGGI TEDDIPQIKQ
RMQEKGFI