| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0822 |
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| Symbol | |
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| ID | 4185962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 925453 |
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| End bp | 927024 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638070827 |
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| Product | LRR-like protein |
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| Protein accession | YP_677448 |
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| Protein GI | 110637241 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.297337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.386181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTATAT CCATAACGGT TGCTTCTGCG CAGGGAACCT ATGTGATTCA GGATGTTAAT
TTCAAAAACA AATTACAATC CAGTTATCCA TGGGTTATGA CAGGCAACCA GTTAAATATT
ACTGCTGCCG GTATGTTTAC CAATGATCTC ATTCTGACAG GTGCAAACAT TTCAAATTTA
GATGGCATTC AATATTTCAC TTCTGTATTC AAGATAGATG CGTCCTTTAA CAATTTAACG
GCACTTCCGA ATATATCGTC CCTCACACAA TTGAAATACC TGTATGTAAA CTTTAACAGG
CTTACTCAAT TGCCCGACTT AAGCAATCAA ACAAATCTGG TTGAGATACA GGCTACAACA
AATGCTCTTA CCAGTTTGCC TTCTCTTACC AATCTGGTAA ACCTGAATAA TCTTTTCCTT
ACAAATAATA AACTCACCAG CTTACCGAAT ATTTCAACAC TTGTGAATTT AAAGTATCTG
ATCATCGGGA ATAATCCATT TACAAGCTTA CCGGACTTCT CTCCAAATGT ACAGCTGCTT
GAACTGCACG TACACCAGAC AAATATTTCA CAGATCACGG GCCTGGCCCA ATTAACAAAA
CTTACTAAAT TATATTGCTG GGAAAATTCA ATAACTGATC TTTCAGCATT ATCTGACAAC
ACAACATTAA CCGGCCTGTT TGCTTTTTCA AACAAACTCC GTTCGTTACC AACTTTAACA
AACAAACCTA ACCTCAACAG TGTTGAAGTT GAAAAAAATA ATTTAACCTT TGAAGATCTG
CTGCCTTTAA AAACGGTAAC AACACTGACA GATTTCAGCT ACAGTCCGCA GGACAGCCTC
GGCACCTACA CACAGAATAC AATTCGTTCA CAGCAACCGC TTTCTTTATC CATTACCGAA
GATGCCGGCG TAAGCAGCAA CACCTATACC TGGTATAAAA ATGCAGCGCT TTCAGGCATA
ACAACACGGG CGTTCTCTAT AAATAAAACG CAGGTTACCG ACAAAGGGAA ATATTATGTA
AGTATTAAAA ATCCGAACTT GCCTTTATTA ACCTTAACGC ATAGAATCTG GAACATAGAG
GTAACGGACT GTATTGATCT GAATGCATTC TCATTTGATG TCTCCTCAAA CGAGTGCAGT
GGCGGGGCAA CCGTGGAAAC AGCTGTTGTA TTGAATGGCG GTACGGCACC GTACACCTAC
GCATTAATTC CGTTTTACAA TACCGATACC ATACGCAGCT CTACAGGAGA TTTTACACAG
GTGCCTCCGG GCAAATATAC CTTTACGGTG CGCGATGCCA ACAACTGCGG TATAGATTCT
GTACAGACCA TTCCAAAACC AAAAGCGTGC GATCCGGTTA TTACGCCAAA CGGAGATGCG
CATATGAATT CTTATTTTAT TGAACAGAGC GGTCCGGCTA AAATTGTTGA TATGGGAGGT
AAAACAATCC TGCAATTGAC GGCACCGGCT GTATGGTATG GCACCAAGGC TGACGGCACA
TTAGCAGATG CCGGCTATTA TGTGATTATC GTAAACAATA AAAAAATAAC GAACATTACA
GTAGTTCGAT AA
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| Protein sequence | MLISITVASA QGTYVIQDVN FKNKLQSSYP WVMTGNQLNI TAAGMFTNDL ILTGANISNL
DGIQYFTSVF KIDASFNNLT ALPNISSLTQ LKYLYVNFNR LTQLPDLSNQ TNLVEIQATT
NALTSLPSLT NLVNLNNLFL TNNKLTSLPN ISTLVNLKYL IIGNNPFTSL PDFSPNVQLL
ELHVHQTNIS QITGLAQLTK LTKLYCWENS ITDLSALSDN TTLTGLFAFS NKLRSLPTLT
NKPNLNSVEV EKNNLTFEDL LPLKTVTTLT DFSYSPQDSL GTYTQNTIRS QQPLSLSITE
DAGVSSNTYT WYKNAALSGI TTRAFSINKT QVTDKGKYYV SIKNPNLPLL TLTHRIWNIE
VTDCIDLNAF SFDVSSNECS GGATVETAVV LNGGTAPYTY ALIPFYNTDT IRSSTGDFTQ
VPPGKYTFTV RDANNCGIDS VQTIPKPKAC DPVITPNGDA HMNSYFIEQS GPAKIVDMGG
KTILQLTAPA VWYGTKADGT LADAGYYVII VNNKKITNIT VVR
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