Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0220 |
Symbol | |
ID | 4185521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 268147 |
End bp | 270993 |
Gene Length | 2847 bp |
Protein Length | 948 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638070230 |
Product | hypothetical protein |
Protein accession | YP_676852 |
Protein GI | 110636645 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000317657 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.15907 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAAC TTTTACGTTA TGCCTATGTG CTTATATTTT TAGCATGTAT GCCAATCTTA GCCAACGCAC AATGCACCGT TAATGCCGGC GGCAACTTTA ACCACTGTAT GTATTCAAAT GACCCGCTGC TGTTGCAGGC ATCTGTTGCC GGTAATTTTA CCACGTATAG CTGGACAACC ACAGGGACCG GTACGTTTTC AAGCAGTACC ATACTGACGC CACGATATAC ATTCTCCCCG GCAGATGTTG CAAGCGGGTC GGTAACATTA ACGCTTACAG CATCCGGAGG TACCTGCGGA TCTGTTACAG CCCAGTCTGC TATACTTATA TACAGCAGAC CCTCGGTTGT TCTCCAGGAT GAATTTACCG TGTGCGGCTC ACAGATAGCA CTCACTTCCA CTACAGCAGG TGTTGCTACC TATGAGTGGA TCAATATGTT TAATACAGGT GGTGTTTTCT CCACAACCAC AGCACCCAAC ACAACTTACA CAGCATCAGC TGCAGATCTG GCAACGGGTT TTATTATGTT TCGTTTGCGC GCCATAAGCA GTCCGGGAGG ATGTACAAAT GAAGATACCG TTCGTGTAAA CTTTGCAACA GCTCCTTCTG TGAGTGCCGG CGTTAATGCT GTAGTATGTT CGGTTCCGAA TGGTTCAACT GTTGTAGTAA ACAATGCAAT AGCAGTAGGC GGCTTCACTT CCTATGTATG GACAACATCC GGAACGGGTA CATTTACGAA TCCGGCAGCT CTAAATTCCA TTTATACATT ATCAGCGGCA GATGTTGCCG CAGGAAGTGT TGTATTGACC ATCACAGGAA ACAGTACAAC ATGCGGTTCA TCCACCAGTT CACGTACAGT TACGGTGAGC GCTACACCGG TTGTTTCTGC AGGTGCGGAT AAAACTATTT GTACACCCAC AGTACTGCTT AGCGGAACGG TTACTCCGGA ATCCGGTACT ATTATTCAGT GGGAAAGTGC CTATTCATCC GGCGGAACAT TCAATGGCGC AACAACACTA ACACCTGTTT ATATACTGTC TGATGCAGAT ACATCCAGAG GGTATGCCTT GTTGAGATTG CGCGCTACAT CCCTTGCAGG TTGTACAAAC GAAGATACAA TACGGGTGAA TAAACTTACC CGGCCATTTG TTTACGCAGG CGAAGACATT GTTGCATGCA GCGGCAATGT AAGACTTTCT GCTTCGGCAC TGTATGCTGC AACTAAAACA TGGACAACAG CAGGTAGCGG AACATTTTTA TATCCTCATG ATGATACGGC TACTTATGTA CCTTCAGCTA CAGATAGAAC CTCAGGCATG GTTACACTAA CGTATACCGG AACAAACGCC TGTTCAACCA TCAGCAGCAC CGTTAAGGTA AATTTTACAG CAACAGGAAC TGCTCAGGTG AATGCCGGTG CAGATGCATC TGTTTGCGGA ACAGATACTA TTCGTTTAGC AGGTACCATT TCGAACGCAA CAGGGGGAAC CTGGACAGCA AATGGCAGCG GACGTTTTCT TTATCCTGCA TCATCGTTAG TAAATGCTTA TGAATTTTCC GGCGCAGATA AAACTGCAGG CAGCGTTACA TTTACATTAA CATCATACAA CAATGGCGGA TGTACTGCGG GATCGGATCA ACTGATTGCA ACGATAAAGG CTGGATCAGC TACAACAGTA TATGCCGGAC CAGATCAGGT ATCGTCAGCG ATGATACAGT TGAATGCAAG TGTTACAAAT GCAACAGGCC AGATTTGGGA AACATCCGGA AGCGGCTTGT TTACTCCAAA TCCCACATCT CTAAATGCAT TTTACATTCC TTCAGCACTG GATATTACTG TGGGTAGTGT AGAACTTACA TTAAAGGCCA CAGGTACCTG CGGCATTGTA TCCGATGCGT TAACACTATT TACATCTGTT CCGTCTTCTA TCAGCGGAAC GGTAAACGCA GGTACTAATA CATTAGATCG TGGTATTGTT TATTTATATG TTTTTGATGC GGTTGAAGGT AAAAAAATAG CAGGTATAGA TACCATTTAT CAAACAGACA ATGGCGTTTA TGAATTTGAT GCAGTATCTA ATGGTACATA TACAATTTAT GCAGTGCCAT TAAACCCAAC TGTATACGCT GCATCGTATC TGGCTACATA TTATGGAAAC GCATCACCAA CAGAGTGGGC ATCGGCAGAA CAGACGCTTG TACAAAACGG TTCTGTAAAT GTATTTGATA TTCAATTGGC AGCATATACA AGTGCTTTGC CAAACTGGAA TACAGGTAAT GATGTAATTG CAGGAACGGT GTTTTTAAAT ATTCCGGCTG CAAATGCGCG TTTAGCCGGG CCAAATGATG TGCCGTTGTC CGGTGCGGTT GTATATTTAA CAACCGTTTC AGGTGATGTG ATTACATATA CGGTAACAGA TAAAAATGGC ATGTATAGAT TTGATCATGT ACGCACAGGA AATTATCTTA TTTCTACTGA ATATGTTTCT ACAGAAACAG AAGACAAACC GGTTACTGTA GATGGTAATC CACAAACGGT AGAAGATGGC AATGCTTTTG CAAGTAGAGT GAGCAGTACA ACAGGCGTGG TTTCATCTGT AAAATCTGTA TCTGTAACAG CGTATCCAAA TCCGGCAACG GATAATGTTT CCATCCGATT AACTAAAACA GGGAACTGTT CTATTAAAAT ATTAGATGAA ACGGGAAAAC TTCATGCAGA ACAGCAGACA ACGATTCAGG CAGATAACAT TGCAAACGTT TCGCTTGAAG GTATGCAAAA AGGCTTGTAT ATTATTCAGG TTGTTTTTTC AGAAGAAGTA TATACGACAA AAGTAGTTAA GTTCTAA
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Protein sequence | MLKLLRYAYV LIFLACMPIL ANAQCTVNAG GNFNHCMYSN DPLLLQASVA GNFTTYSWTT TGTGTFSSST ILTPRYTFSP ADVASGSVTL TLTASGGTCG SVTAQSAILI YSRPSVVLQD EFTVCGSQIA LTSTTAGVAT YEWINMFNTG GVFSTTTAPN TTYTASAADL ATGFIMFRLR AISSPGGCTN EDTVRVNFAT APSVSAGVNA VVCSVPNGST VVVNNAIAVG GFTSYVWTTS GTGTFTNPAA LNSIYTLSAA DVAAGSVVLT ITGNSTTCGS STSSRTVTVS ATPVVSAGAD KTICTPTVLL SGTVTPESGT IIQWESAYSS GGTFNGATTL TPVYILSDAD TSRGYALLRL RATSLAGCTN EDTIRVNKLT RPFVYAGEDI VACSGNVRLS ASALYAATKT WTTAGSGTFL YPHDDTATYV PSATDRTSGM VTLTYTGTNA CSTISSTVKV NFTATGTAQV NAGADASVCG TDTIRLAGTI SNATGGTWTA NGSGRFLYPA SSLVNAYEFS GADKTAGSVT FTLTSYNNGG CTAGSDQLIA TIKAGSATTV YAGPDQVSSA MIQLNASVTN ATGQIWETSG SGLFTPNPTS LNAFYIPSAL DITVGSVELT LKATGTCGIV SDALTLFTSV PSSISGTVNA GTNTLDRGIV YLYVFDAVEG KKIAGIDTIY QTDNGVYEFD AVSNGTYTIY AVPLNPTVYA ASYLATYYGN ASPTEWASAE QTLVQNGSVN VFDIQLAAYT SALPNWNTGN DVIAGTVFLN IPAANARLAG PNDVPLSGAV VYLTTVSGDV ITYTVTDKNG MYRFDHVRTG NYLISTEYVS TETEDKPVTV DGNPQTVEDG NAFASRVSST TGVVSSVKSV SVTAYPNPAT DNVSIRLTKT GNCSIKILDE TGKLHAEQQT TIQADNIANV SLEGMQKGLY IIQVVFSEEV YTTKVVKF
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