Gene CHU_0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0120 
SymbolrplS 
ID4184061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp144449 
End bp144823 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content38% 
IMG OID638070122 
Product50S ribosomal protein L19 
Protein accessionYP_676753 
Protein GI110636546 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0335] Ribosomal protein L19 
TIGRFAM ID[TIGR01024] ribosomal protein L19, bacterial type 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.332554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATT TACTTAAAAT CGTTGAACAG GATTACCTAG CTGTACAAAA AGCACTTCCT 
GAATTCAAAG CAGGTGATAC AATCAATGTT CACGTGAAAA TCAAAGAAGG TGCTAAAGAG
CGTATTCAGC AATATCAGGG TCTTGTAATT CAAAAAAGAA ATTCTGGCAA CGGAGCTTCT
TTCACAGTAC GTAAAATCTC TGCAGGTATC GCAGTTGAGC GTATCTTCCC TACAATGTCT
CCATTCATTG ATAAAATCGA AGTATTGCGT GCAGGTGCTG TTCGTAGAGC TCGTTTGTTT
TACTTACGTG ACAAAACGGG TAAAAACGCT CGTATTAAAG AAAAAAAGAA GCCGGTTGTT
GAAGCTGCAA AATAA
 
Protein sequence
MSNLLKIVEQ DYLAVQKALP EFKAGDTINV HVKIKEGAKE RIQQYQGLVI QKRNSGNGAS 
FTVRKISAGI AVERIFPTMS PFIDKIEVLR AGAVRRARLF YLRDKTGKNA RIKEKKKPVV
EAAK