Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_1647 |
Symbol | glyA |
ID | 5408323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 1569178 |
End bp | 1570425 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640871317 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_001407170 |
Protein GI | 154149300 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAATT TGGAAAATTT TGATAAAGAA ATTTTTGATT TAACAAACAA AGAGTTACAA AGACAATGTG ATTATTTGGA AATGATTGCA AGTGAAAATT TCACATATCC TGAAGTTATG GAAGTAATGG GTTCTATACT TACAAACAAA TATGCTGAAG GATATCCAGG TAAAAGATAT TACGGTGGTT GCGAATTTGT AGATGAAATA GAGCAAACAG CAATTGATCG TTGCAAAAAA CTTTTCGGCT GCAATTTCGC AAATGTCCAA CCAAATAGCG GAAGCCAAGC TAATCAAGGT GTTTACGGAG CTTTTATAAA ACCGGGCGAT AAAATTTTAG GTATGGATTT AAGTAACGGC GGACACTTGA CTCATGGCGC AAAAGTAAAT GCAAGTGGTA AATTTTATAG CAGCTTTTTT TACGGCGTGG AAATGGACGG AAGAATAGAT TATAACAGAG TTGCTGATAT TGCTAAAATC GTAAAACCGA AACTAATCGT TTGCGGCGCA AGCGCATATC CAAGAGAGAT TGATTTTGCA AAATTCAGAG AAATCGCAGA TAGCGTCGGA GCATTTTTAT TTGCAGACGT AGCTCATATA GCAGGTCTTG TAGTTGCCGG AGAGCATACA AATCCGTTTC CATATTGCCA CGTAGTAAGC TCTACAACAC ATAAAACTTT AAGAGGTCCT AGAGGCGGAA TTATTATGAC AAATGAAGAA GAATTTGCCA AAAAAATCAA CTCAAGCATT TTCCCAGGAA TGCAAGGCGG CCCGCTTGTC CATGTTATCG CAGGAAAGGC GGTCGGTTTT AAACATAATT TAAGTCCTGA ATGGAAAACT TATGCAAAAC AGGTAAAAGC AAATTGCAAA ATTTTAGGTG ATACGCTAAT GAAACGCGGC TTTGATTTGG TAAGCGGCGG AACGGATAAT CACTTAATTT TAGTTAGCTT TTTGAAAAAA GATTACAGCG GAAAAGACGC AAGCAACGCG CTTGAAAATG CAGGAATTAC CGTAAATAAA AATACGGTTC CTGGAGAAAC AAGAAGCCCC TTTGTAACAA GCGGCATTAG AGTAGGAAGC GCAGCTCTTA CATCACGCGG TATGAAAGAA AAAGAATTTG AATGGATTGC AAATAAAATT GCCGATGTGC TTAATGATAT AAACAATACT TCACTTCAAA GTAAAATAAA AGCCGAAGTT AAAGAACTTG CAAGTAAATT TATTATTTAT GATAAAGCTA TGTTTTAA
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Protein sequence | MSNLENFDKE IFDLTNKELQ RQCDYLEMIA SENFTYPEVM EVMGSILTNK YAEGYPGKRY YGGCEFVDEI EQTAIDRCKK LFGCNFANVQ PNSGSQANQG VYGAFIKPGD KILGMDLSNG GHLTHGAKVN ASGKFYSSFF YGVEMDGRID YNRVADIAKI VKPKLIVCGA SAYPREIDFA KFREIADSVG AFLFADVAHI AGLVVAGEHT NPFPYCHVVS STTHKTLRGP RGGIIMTNEE EFAKKINSSI FPGMQGGPLV HVIAGKAVGF KHNLSPEWKT YAKQVKANCK ILGDTLMKRG FDLVSGGTDN HLILVSFLKK DYSGKDASNA LENAGITVNK NTVPGETRSP FVTSGIRVGS AALTSRGMKE KEFEWIANKI ADVLNDINNT SLQSKIKAEV KELASKFIIY DKAMF
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