Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0672 |
Symbol | thiC |
ID | 5409122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 619327 |
End bp | 620676 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640870372 |
Product | thiamine biosynthesis protein ThiC |
Protein accession | YP_001406253 |
Protein GI | 154148026 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.936222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAGTC AGTGGCTGAA AAACAGAAAA AATGATAAAA CTCCAACACA GATGTATTAT GCAAAAAACG GCATAATAAC GGAAGAAATG CGTTATGTAG CTAAAATAGA GCAAATGGAC GCTGAAATTT TAAGAAGTGA AGTTGCTCGC GGTAAAACTA TAATTCCTGC AAATATAAAT CATACAAATC TCGTTCCTAT GGGAATCGGA CGAAGTTTAA AATGTAAGAT AAACTCAAAT ATCGGCTCAT CAAGTGTAAG CTCGGGCGTT GAAGAAGAGG TTGAAAAACT TAAAATTTCC ATAAAATACG GCGCCGATAC GGTTATGGAT TTAAGTACAG GCGGTGATTT AAATGAAATC AGAACGCAAA TAATCAAAAA CTCTACCGTT CCAATCGGCA CTGTACCGAT ATATCAAATC ATTCATGATG TCGGCTCCAT CGAAAATTTA ACAATTTCTC AAATGCTTAA AACGATTGAA AATCAAGCGA TTCAAGGCGT CAGTTATTTT ACGATTCACG CCGGTTTTTT GCTTGAGTTT ATGCCGCTTG TAGCAAAGCG TAAAATGGGA ATAGTAAGTC GAGGCGGTTC ATTAATGGCT ACCTGGATGA TGAAAAACCA TAAAGAAAAT CCTTTTTTTA CGGCTTTTGA TGAAATTTTA GAAATTTGCG CAAAATACGA TGTTTCTCTT TCTTTAGGAG ACAGTTTACG TCCAGGATGT ATATATGACG CAAGTGATGC CGCTCAAATA AGCGAACTGA AAATTCTTGG CGATTTGGCA AGAAGAGCTT GGACAAAAAA TGTGCAAGTT ATGATAGAAG GTCCGGGACA CGTGCCTTTC AATGAAATTG CTTCAAATAT GCAACTTGAA CGTGTGCTTT GTGATGATGC ACCTTTTTAT GTGCTTGGGC CGCTTCCTAC TGATATCGGA GCAGGATACG ATCATATCAC AAGTGCGATT GGCGGGACTA TGGCTGCATT TTCAGGCGCT TCAATGCTTT GTTATGTTAC GCCGAAAGAA CATCTAGGTT TGCCTAATGC TAAAGATGTG CGTGAAGGTA TAGTAGCTCA TAAAATCGCA GCTCATATAG CGGACGTGGC TCTTGGTAAA AAAGGCGCAA TCGAAAGAGA TCATGCGATG AGTGATGCAA GATATAATTT TGATTGGAAT AAACAGTTTG AGCTTAGTTT GGATCCGGAT AGAGCAAAAG AATATCACGA TGAAACGCTG CCACAAGAGG TTTTTAAAGA GGCTGAGTTT TGTTCTATGT GCGGACCGAA ATTCTGTGCT TACAAAATAA GTCGTGAAAT CTCAAAAAAT TCATGCGAAT TTTATAAGGA ATGCAAATGA
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Protein sequence | MRSQWLKNRK NDKTPTQMYY AKNGIITEEM RYVAKIEQMD AEILRSEVAR GKTIIPANIN HTNLVPMGIG RSLKCKINSN IGSSSVSSGV EEEVEKLKIS IKYGADTVMD LSTGGDLNEI RTQIIKNSTV PIGTVPIYQI IHDVGSIENL TISQMLKTIE NQAIQGVSYF TIHAGFLLEF MPLVAKRKMG IVSRGGSLMA TWMMKNHKEN PFFTAFDEIL EICAKYDVSL SLGDSLRPGC IYDASDAAQI SELKILGDLA RRAWTKNVQV MIEGPGHVPF NEIASNMQLE RVLCDDAPFY VLGPLPTDIG AGYDHITSAI GGTMAAFSGA SMLCYVTPKE HLGLPNAKDV REGIVAHKIA AHIADVALGK KGAIERDHAM SDARYNFDWN KQFELSLDPD RAKEYHDETL PQEVFKEAEF CSMCGPKFCA YKISREISKN SCEFYKECK
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