| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_1142 |
|---|
| Symbol | lysS |
|---|
| ID | 4539481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | - |
|---|
| Start bp | 1133004 |
|---|
| End bp | 1134518 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 639746512 |
|---|
| Product | lysyl-tRNA synthetase |
|---|
| Protein accession | YP_892300 |
|---|
| Protein GI | 118475508 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0716049 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATATTTG AAAATGAATT AGAATTAACA AGGTTAGCTA AAGCAGATGA GCTTAGAAGC
TTAGGAGTAA ATCCATATCC TCACTTTTTA AAACGCGATA TGAGTATTAG CGAGTTTAAA
ACCAAATTTG CCTATATCAA AGATTTAAAT GGCGATGAAA AAAAAGCAGA TGAAGAAGTA
ACTATTTCAG GGCGTTTGAA ACTAAAAAGG GTGGCCGGAA AATCTACTTT TGCAAATATG
GAAGATGAAA ATGATAATAT TCAAATTTAC TACTCTTTAG GCAGTATAGG CGAAGAAGAT
TATACTAAAT TTAAAAAAAA TCTGGAAGTC GGAGATATAG TATTAGTCAC CGGATACGCG
TTTGTAACAA AAACCGGTGA GTTTAGTATC CATGCAAGTA AAATAGTATT AGCTAGTAAA
GCTATCAGTC CTCTTCCAGA GAAGTTTCAC GGTCTTACCG ATATCGAGAT GAGATATCGT
CAAAGATATC TTGATATGAT AATGGATAAA GATGTTAGAG CCGATTTCGT AAAACGCTCA
CTTATAATAA GCACTATTCG AAGATTTTTT GAAGATAAAG GCTTTTTGGA AGTTGAAACT
CCTATGATGC ATCCGATAGC TGGCGGGGCA AACGCAAAGC CGTTTATCAC TCACCATAAC
GCACTAGATG TGGATAGGTA TTTGAAAATC GCTCCGGAGT TATATCTAAA AAGACTTATT
GTAGGTGGTA TGGAAGCCGT GTTTGAGATG AATAGATGTT TCAGAAATGA AGGAATGGAC
CTTACTCATA ATCCGGAATT TACAAGCATT GAGTTTTACT GGGCATGGCA TAATTATTTT
GAAGCAATGG ATTTAACTGA AGAGTTATTT GCTGTTTTAT TAGATAGATT AAATTTACCA
CAAGTTATCG AATTTGATGG TAAAAGTATT GATTTTTCTA AGCCTTTTGC TAGAGTAAAA
TACATAGACG CCATAGTTGA AATCGGTGGT ATTAGCAGAG ATATAGTTAC TAATAAAGAT
AAAATTTTAT CAAAATTAAA AGCAGATAAA TTTGAAGCGA ATGATAAGCT GGATCTTGGT
CATTTACAAG CTGAACTTTT TGATAATTAT GTTGAAGATA AGCTAATAAA TCCAACATTT
ATAGTGGATT TTCCTATATC TATAAGCCCG CTTTCAAGAA GAAGTGATGC AGATAAAAAT
GTAGCCGAAA GATTTGAGCT GTTCATCGCA GGTCGTGAGT TGGCAAATGC ATTTAATGAG
TTAAATGATC CAGTTGATCA GTATGAGAGA TTTAAATCCC AAATAGAAGC AAAAAATGCA
GGAGATGATG AGGCGCATGA GATGGATGAA GATTATTGTC AAGCATTAGG CTATGGTATG
TCTCCAACCG TAGGATGGGG ACTTGGCGTT GATAGGTTAG TAATGCTGCT TCTAAATAAA
AAGTCTATAC GAGATGTTAT ACTTTTTCCT GCTATGAAAC CACTAAAAAC CGAAAATAAG
GAGAATAAAA AATGA
|
|---|
| Protein sequence | MIFENELELT RLAKADELRS LGVNPYPHFL KRDMSISEFK TKFAYIKDLN GDEKKADEEV
TISGRLKLKR VAGKSTFANM EDENDNIQIY YSLGSIGEED YTKFKKNLEV GDIVLVTGYA
FVTKTGEFSI HASKIVLASK AISPLPEKFH GLTDIEMRYR QRYLDMIMDK DVRADFVKRS
LIISTIRRFF EDKGFLEVET PMMHPIAGGA NAKPFITHHN ALDVDRYLKI APELYLKRLI
VGGMEAVFEM NRCFRNEGMD LTHNPEFTSI EFYWAWHNYF EAMDLTEELF AVLLDRLNLP
QVIEFDGKSI DFSKPFARVK YIDAIVEIGG ISRDIVTNKD KILSKLKADK FEANDKLDLG
HLQAELFDNY VEDKLINPTF IVDFPISISP LSRRSDADKN VAERFELFIA GRELANAFNE
LNDPVDQYER FKSQIEAKNA GDDEAHEMDE DYCQALGYGM SPTVGWGLGV DRLVMLLLNK
KSIRDVILFP AMKPLKTENK ENKK
|
|---|
| |