| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0719 |
|---|
| Symbol | |
|---|
| ID | 4539277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | - |
|---|
| Start bp | 724183 |
|---|
| End bp | 725892 |
|---|
| Gene Length | 1710 bp |
|---|
| Protein Length | 569 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 639746105 |
|---|
| Product | oligoendopeptidase F, putative |
|---|
| Protein accession | YP_891894 |
|---|
| Protein GI | 118474498 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1164] Oligoendopeptidase F |
|---|
| TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.954418 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATGGG ATTTAACTCT ATTTTTCAAA AATAGTGATG AGCTTGATAA GTTCAGCAAA
AATTTAGAGA AAAAAGCAAA GAACTTTAAT CAAAAATATA GTAAAAATTT AGAACAATTG
AACGATAGCG AGTTCCTAGC CTCTATACAA GAATATGAGA ATATTTTAGC TGGTATAAAT
AAGATTATGA GCTATGCTTA TTTGAAATTT GCTAAAGATA CTACAAACGG CTCTTTTTTA
GCAAAATATG AAGAAATTTG TACAAAAATA GAAGAAAATT TGCTATTTTT TACTATTGAG
TTCAACGAGA TATCAAAAGA GCAGCAAGAC AGTTTTATAG CTTATTCAAG ACCTTATAGT
TACTATCTTA ATCTTATAGC AAAGCAGAAA TCGCATCAAT TAAGTTTTCT TGAAGAAAGG
GTTCTTTTAA AAACAGCAAA TACCGGAGCA AATGCATTTT CAAGGCTTTT TGATGAAAGT
ATGGCAAGGC TTAAGTTTGA TTTTAGAGGT TTAGTCTTAA GCGAAGAAGA AATTCTATCG
AAAATGCTAG ACAGCGATAG AAGCGTAAGA AAAGACGCGG CCTTATCTCT TAGCAAAACT
CTTGAGCAAA ATAAACACAT TCTAACATAT ATTTATAATA TGATAAAAAC AGATCTAAAA
AACGAGTGTG AGCTAAGAAA TTATGAACTT GCAGAATCAA GCAGACACGA GAGCAATCAA
ATAGAAAAGC AAAGCGTAGA TGCTCTCATA AAAGCAACTG AATCTAGCTT TGATCTTGTT
TCTAAATTTT ATCATAAAAA AAGAGAGCTT CTAGGATACG AGAAGCTTTA TGATTATGAT
AGGTATGCGC CTCTTAACAA TGAGAGCGAA TTTAACTATG AAGAGGCAAA AGAGATAATT
TTAAAAGCTT TTAACTCTTT TAATCCACTT TTCGCAAAAC TTGCAAAAAG AGCTTTTGAT
GAAAACTGGT GTGACGTATA TCCGGCTAAA AATAAACAAA GCGGCGCTTT TTCGCATTCA
GCCTCAAGCG ACACTCATCC ATTTGTACTA CTAAATTATA CAAACAAAAG ACGCGATCTT
TTTACCGTAG CTCATGAGTT AGGGCACGCA ATACATCAGT TTTTAAGCTA CAAAGTTGGA
TTTTTGAACT CAAACACTCC TCTTACTACA GCCGAAACTG CTTCCGTGTT TTGCGAAATG
CTAGTGTTTG AATATGTAAA AAACAGAACC AGCGATACAA AACTATCTGG ATTGTTGGCA
GGTAAAATAG AAGATATTTT TTCTACTTTA TATCGTCAAA TAAATTTTAC CACATTCGAA
AGACGAGTTC ATGCTTTTGA AGGTGAAATT TCTAATGAAA ATTTAAATGA TATTTGGTAT
GAAGAGTCTA AAAAAATGTT TGGCGATAGT CTGGTTTTAA ACGATTATTA TAAAATTTGG
TGGAGTTATA TACCTCATTT TATACATTCT CCGTTTTATT GTTATGCATA CAGCTATGCT
CAGTTGCTTG TGCTTGCTCT ATTTGGACTA TATAAAAGCG GAAAATGTGA AAACTTTGTA
GAAATTTATA CTGAGTTTTT GAGCCTTGGC GGAAGCAGAA GTCCAAAAGA CATGGTAGCA
ATGTTTGGAT TTGATATAAA TAAAGAGGAA TTCTGGCAAA TAGGACTTGA TGAAGTTAGG
AATTTAGTAA ATGAGTTTAT ATCTATTTAG
|
|---|
| Protein sequence | MQWDLTLFFK NSDELDKFSK NLEKKAKNFN QKYSKNLEQL NDSEFLASIQ EYENILAGIN
KIMSYAYLKF AKDTTNGSFL AKYEEICTKI EENLLFFTIE FNEISKEQQD SFIAYSRPYS
YYLNLIAKQK SHQLSFLEER VLLKTANTGA NAFSRLFDES MARLKFDFRG LVLSEEEILS
KMLDSDRSVR KDAALSLSKT LEQNKHILTY IYNMIKTDLK NECELRNYEL AESSRHESNQ
IEKQSVDALI KATESSFDLV SKFYHKKREL LGYEKLYDYD RYAPLNNESE FNYEEAKEII
LKAFNSFNPL FAKLAKRAFD ENWCDVYPAK NKQSGAFSHS ASSDTHPFVL LNYTNKRRDL
FTVAHELGHA IHQFLSYKVG FLNSNTPLTT AETASVFCEM LVFEYVKNRT SDTKLSGLLA
GKIEDIFSTL YRQINFTTFE RRVHAFEGEI SNENLNDIWY EESKKMFGDS LVLNDYYKIW
WSYIPHFIHS PFYCYAYSYA QLLVLALFGL YKSGKCENFV EIYTEFLSLG GSRSPKDMVA
MFGFDINKEE FWQIGLDEVR NLVNEFISI
|
|---|
| |