Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_1507 |
Symbol | |
ID | 5406515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 145074 |
End bp | 146414 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640871604 |
Product | mate efflux family protein |
Protein accession | YP_001407445 |
Protein GI | 154174619 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00640866 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTCA CAAAAGAGCC GGTAAATCGG CTCATCATCA CTTTAGCCGT GCCTGCCGGG ACGGCGATGA TGTTTAACAC GCTTTATAAC GTGACCGGGA CGTTTTTTGC CGGGACGATC TCCACGTCCG CAGTCGCCGG ACTGTCGATG AGCTTTTTGC TCTATCTTAG CATCGTTGGC ATAGGGCTTG GATTTGGCTC GTCGCTGACG GCACTCATTG GCAACTCGCT AGGCGCTGGA CGCGAGTTTT TAGCTAGAAT TTACGCTGCA AAGGGCGTCA TCTTTGTGCT GATGTTTGCT ATTGTTATGG GCACCTTTGG CTTTTTCATA GCTCCTAAGC TGCTTGTATT TTTGGGTGCA AACGACGAAT TTTTAGACGA AGCGCTCGAA TATATAAGGG TGATTTTCCT CGCTTCGCCA TTTTTTCTGC TCATAAAGTC GCTAAATGGC ATCCTAGTCG CGCTAGGCGA TACGAAAACT TACAGGAATT GGCTATTTTA TGGCTTTTTC ATCAACATAG CCTTTTGTTT CATAAATGTT AAAATTTTAG ATCTAGACGT TGGCGGCATA GCGTTCGCGA CGGCTAGCGT GCAGTTTTTA GGAGCAATAT TTTTATTTGT GAAAGTCTAT AAAAGTGGCA TGATAAATTT CAGCTCTCTT AAAATTTTCT TGCCTGACGC TAGGATCTAC GCTAAAATTT TAAAACAAGC CGTGCCTGCG TGTCTAAACT ACCTCTCGAT GTCGCTTGGA GGGCTTGTGC TGTTAAAATT CATCAGCCTT TACGGCACTA GCGCGGTCGC AGGGTATGGC ATCGCTCTTC GCATCGAGCA GATAGTCGTG CTACCAACGA TCGGCATCGC TGCGGCCGTG CTTAGTGTGA TATCTCGAAA TTTCGGCGCT CGCGAATACG CCCGCGTGCA AGAGTGCTAC AAAAACGCAC TTAGGATATT GCTTTATTAT TGCCTCTTTG CCTGCGCTTT TTGCGTGCTT TGCGGAAGCT ACATCGTGCG GCTATTTGAC GCGAACGCTC AGGTCGTTTA TGTCGCGCAG AGCTATTTGC TGGTAAATTC CTTCGCTTAC ATAGGATATG GCGTCATAAA CGTCTCTGGA AGCGCACTTC AAGCGGTGAA AAGACCGAGC ATGGTTTTCG TGCTAAACGC GATCAGGCAG CTTGTTTTGC AAATTTGCTT GTATTCGTTC GTGGTTTTTG TCTTAAATGG CGACATCACA TATATCTGGC GCGCGATGTT TTTCAACGTC TACCTCATCG CAGGCTGCTT TCTTTTGTGG ACGATCTTTG TTTTAAGGAG GGCTCATGCG ACTTCAAGAC GAACTACGTG A
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Protein sequence | MDLTKEPVNR LIITLAVPAG TAMMFNTLYN VTGTFFAGTI STSAVAGLSM SFLLYLSIVG IGLGFGSSLT ALIGNSLGAG REFLARIYAA KGVIFVLMFA IVMGTFGFFI APKLLVFLGA NDEFLDEALE YIRVIFLASP FFLLIKSLNG ILVALGDTKT YRNWLFYGFF INIAFCFINV KILDLDVGGI AFATASVQFL GAIFLFVKVY KSGMINFSSL KIFLPDARIY AKILKQAVPA CLNYLSMSLG GLVLLKFISL YGTSAVAGYG IALRIEQIVV LPTIGIAAAV LSVISRNFGA REYARVQECY KNALRILLYY CLFACAFCVL CGSYIVRLFD ANAQVVYVAQ SYLLVNSFAY IGYGVINVSG SALQAVKRPS MVFVLNAIRQ LVLQICLYSF VVFVLNGDIT YIWRAMFFNV YLIAGCFLLW TIFVLRRAHA TSRRTT
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