| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_1068 |
|---|
| Symbol | |
|---|
| ID | 5407804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | + |
|---|
| Start bp | 963855 |
|---|
| End bp | 965525 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640872416 |
|---|
| Product | putative cell division protease FtsH-like protein |
|---|
| Protein accession | YP_001408236 |
|---|
| Protein GI | 154174286 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0465] ATP-dependent Zn proteases |
|---|
| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.427704 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAT TCAGTTTTAA ATTCAACAAA AAAAATATCT TGATCATAGC GGCGGTGCTT
TTAGTCGTCG TCCTGGCTCT TGCCGTGAGC AAAGAGCCAA AGAGCATAAG CTACGAAGGA
TATATGCAGC TTCTTAGCGG CAACTTCATC GACAAGGCCG TAATCGATGA AGACGACGTC
ATACTCTACG CCCAAAATAA CCGCTACAAG ATCATAAAAG ACGGCGTGGA TATAAAGGAG
CTCGTCAAAA AAGTGCCCGT CGAGCGAGCG AAAAACTATA TCGTGATGAG CGAAATTTTC
ACCATTTGTT TCATACTGTT GATATTTTTT GTAGCGGTGC TTTTACTGCT TAGATTTAGA
AAAAAGAGCC AGCCAGCCGG TGATAAAACG CCGGCTTACG ATCTTGAAAG CATAGTAAAT
TCCTTCGCTA CACCGGTAAT TTCAAACGTG AGATTTGACG ATGTAGCCGG TATCGATGAT
GTCAAAATGG AGCTTAGCGA GATCGTGGAC TTTCTAAAAA ACCCTATAAA ATACCGAAAT
TTCGGTATCA AAATGCCAAA AGGCGTGCTG ATGATAGGGC CTCCTGGCGT GGGTAAAACG
CTCGTGGCAA AGGCGGTCGC CGGAGAGGCG AACGTACCGT TTTTTTATCA AAACGGCGCT
AGCTTCGTGC AAATTTACGT CGGTATGGGC GCAAAACGTG TCCGTGAGCT TTTTAACAAG
GCAAAATCCT ACGCCCCATC GATCATCTTT ATCGACGAGA TAGATGCGGT GGGAAAGAGC
AGGGGAGGTA GCCGCAACGA CGAGCGCGAA GCCACGCTAA ATCAGCTTCT CACCGAGATG
GACGGCTTTG AAGACAACTC AGGCGTCATC GTGATCGCAG CGACGAACCG CATCGAGATG
ATCGACGAGG CGCTGCTTCG CTCGGGGCGA TTTGACAGGC GTATTTTCCT ATCCATGCCT
GATTTCAAGG ATAGAATGGC GATATTAAAG ACCTATTTAA AAGGCAAAAA ATGTGAAGCC
GACGTGAGCG ATATAGCCAA GATGAGCGTA GGCTTTTCAG GGGCGGCACT AAGCACGCTC
GTGAACGAAG CGGCGATAAA CGCGCTAAGA AACGGCAGTG AAATTTTAAG GATGGGTGAC
TTTGAAGCGG TCTTAAACAA GGTTTTACTC GGTAAAAAAA AGGTGCTAAG CTACTCCGAG
TCCGAGAAAA AGATACAAGC GACCTATCAG GCGGCAAAGG CGCTGGCCGC TTTTTGGTTT
GACGTGAAAT TCGACAAAAT TTCACTCATC GAGGATAGGT TTGTCGGTAT CGAAAGAGAG
ATAGAGTCGC GCTCGCAAAT GATCTCTCGC ATAAAGGTTT TTTTAGCCGG TATGTGCAAG
CTGGAGCTCG ACGAGAACGA TATATTTTCA AATTCTAGCA CGGACTTGAA CTACGCAAAA
GACTTGGCCT CAAAGATGGT CTACGAATAC GGCATGGGAA AGTCTTTCGT GCCAAATCCT
GCAGACGTTG AGGAAATTTT GAGCCAGGCA AGAGAAGAAA CCATAAGCTT TTTAAAGGGC
GTAAGCATGC AAATAGCGCG TATCAGCGAA TTTTTGCTAG TCTATGAGAG CGTGGATAAA
GAGATGGTGG CAAATATATT AAACGAGACT TATGAACTGG AGGATAAATG A
|
|---|
| Protein sequence | MQKFSFKFNK KNILIIAAVL LVVVLALAVS KEPKSISYEG YMQLLSGNFI DKAVIDEDDV
ILYAQNNRYK IIKDGVDIKE LVKKVPVERA KNYIVMSEIF TICFILLIFF VAVLLLLRFR
KKSQPAGDKT PAYDLESIVN SFATPVISNV RFDDVAGIDD VKMELSEIVD FLKNPIKYRN
FGIKMPKGVL MIGPPGVGKT LVAKAVAGEA NVPFFYQNGA SFVQIYVGMG AKRVRELFNK
AKSYAPSIIF IDEIDAVGKS RGGSRNDERE ATLNQLLTEM DGFEDNSGVI VIAATNRIEM
IDEALLRSGR FDRRIFLSMP DFKDRMAILK TYLKGKKCEA DVSDIAKMSV GFSGAALSTL
VNEAAINALR NGSEILRMGD FEAVLNKVLL GKKKVLSYSE SEKKIQATYQ AAKALAAFWF
DVKFDKISLI EDRFVGIERE IESRSQMISR IKVFLAGMCK LELDENDIFS NSSTDLNYAK
DLASKMVYEY GMGKSFVPNP ADVEEILSQA REETISFLKG VSMQIARISE FLLVYESVDK
EMVANILNET YELEDK
|
|---|
| |