Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0428 |
Symbol | |
ID | 5406879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 1687994 |
End bp | 1688668 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640873144 |
Product | macrolide export ATP-binding/permease protein MacB |
Protein accession | YP_001408934 |
Protein GI | 154173956 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00313991 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAACG CATTGGAACT TAAACATATT TGTAAGAAAT TTGGCGACGT AAGCGCGCTT GATGATATAA ATTTCGAGGT CAAAAAAGGC GAGTGGGTCA GCGTGATGGG CCCAAGCGGT AGCGGTAAGA GCACGCTTGT AAATATACTC TCTTTGATGG ATACGCCAAC AAGTGGCGTT TATATGCTAG GCGGCGATGA TGTGAGCAAC CTAAACGCCG AAGATACGCT TAAATTTAGA CGTGAAAAGA TCGGGCTTAT ATTTCAGCAG TTTCACTTGG TGCCCTATCT TAGTGCGCTT GAAAACGTGA TGATAGCGCA GTATTATCAT AGTAGCGTCG ATGAAGAGGA TGCTAAAAAG GCGCTTGAAG CAGTTGGTCT GGCTCATCGC TTGACGCATA GACCAAGTCA GCTAAGTGGC GGCGAGCAAC AACGCCTTTG TATCGCACGC TCGCTCATAA ACGATCCTGA AATTTTGATA GCGGACGAGC CTACGGGCAA CCTCGACGAA GCGAACGAAA AGGTCGTGCT GGAGCTATTT TGCAAGCTAA GAGAGCAGGG CAAAACGATA CTTCTTGTCA CGCACAACCC AGAGCTTGGC GAATACGGCG ATAAGATCGT CTACCTAAGA TACGGTAAGC TTGAAAATAT CCGCACTCTA AAAAGAGACG CATGA
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Protein sequence | MSNALELKHI CKKFGDVSAL DDINFEVKKG EWVSVMGPSG SGKSTLVNIL SLMDTPTSGV YMLGGDDVSN LNAEDTLKFR REKIGLIFQQ FHLVPYLSAL ENVMIAQYYH SSVDEEDAKK ALEAVGLAHR LTHRPSQLSG GEQQRLCIAR SLINDPEILI ADEPTGNLDE ANEKVVLELF CKLREQGKTI LLVTHNPELG EYGDKIVYLR YGKLENIRTL KRDA
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