| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_2044 |
|---|
| Symbol | |
|---|
| ID | 5596730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1280896 |
|---|
| End bp | 1281699 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640929843 |
|---|
| Product | heat-inducible transcription repressor |
|---|
| Protein accession | YP_001467125 |
|---|
| Protein GI | 157164960 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0514653 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTAAAAG TGAGTAAAAC AAATAAACGC GATTTGATAC TAAATTCTAT CATTGAAGCC
TATTTGCAGG ACAATGCGCC TATTGGCTCA AACGAGCTTG GCTCTCGTAT GAGCGTGGCG
ATACCGGCAT CGACGATACG TGTTTATTTT AAAAAGCTTT CAGATGAGGG TGAGATCACA
AAGCTTCACA TCAGTGGCGG CAGGATCCCA ACTATCGCTG CGATGAGGAG ATATTGGAGT
GAAATTTTTA CTGAGAGCGA CATAAATTTA GAGATAAATG ACCCAAGAAG CTTAAAGATG
CTCTGTGATG AGTTTGAGCT TTATTGTATG ATTTTTGGCA CGATCGATAA GGAGTTGCTA
GAAATTTTAA ATTTAAATGA TAGATATCTG GTTTTAAATT TTAGTGGCGA TGAGATCGTC
ATCAAATTTG ACGCTAGGAT GTATAAATTT TTAAATAACC TTATCGGAGT TAGTTTAGAC
AAGCTTGAGC TTATCTGTTC TCAAGTTGGC TTAAGCGAAC TAAAAAACAA GATAAGAGAG
CTTAAAAGGA CTAAAATTTA CTTCCAAGAA AACGAAATTT TAGCCTTTGA TATGTTTAAG
GATAGACGCT TTAAGATGGT TTTTGACCCA AGTTTTAGCT TGCAGATGGA CGAAAAGCTT
ACATTTTCTC CTATGTTTGA TGAAAATTAC ATGGGGCTTA AATTTAAAGC AGACTACCTT
GGTAGTGAGG CGCAGATGAT CTGTGCTGGT AGTGTTTATA CTGATTATGT GAAATTTATA
AATCTAATAA AGGAGGCCGC GTGA
|
|---|
| Protein sequence | MLKVSKTNKR DLILNSIIEA YLQDNAPIGS NELGSRMSVA IPASTIRVYF KKLSDEGEIT
KLHISGGRIP TIAAMRRYWS EIFTESDINL EINDPRSLKM LCDEFELYCM IFGTIDKELL
EILNLNDRYL VLNFSGDEIV IKFDARMYKF LNNLIGVSLD KLELICSQVG LSELKNKIRE
LKRTKIYFQE NEILAFDMFK DRRFKMVFDP SFSLQMDEKL TFSPMFDENY MGLKFKADYL
GSEAQMICAG SVYTDYVKFI NLIKEAA
|
|---|
| |