Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CA2559_08486 |
Symbol | |
ID | 9297181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Croceibacter atlanticus HTCC2559 |
Kingdom | Bacteria |
Replicon accession | NC_014230 |
Strand | + |
Start bp | 1857743 |
End bp | 1858276 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | cationic outer membrane protein OmpH |
Protein accession | YP_003716444 |
Protein GI | 298208265 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAATA TTTTATTAGC AGCCTTTTTT ATAGTTACAA CTACTGTAAG TATGGCACAA TCTAAAGTTG GAACAGTAGA TGTAGATTTT ATCTTAACCA ACATGACAGA TGAGCTTAAA AAAGTTAATG ACAGTCTTGC AAATTACGAG GCATCATTAT CTGCACAACT GCAAACTAAG ATGACAGACT ATGAAACTAA GTACAAAGCT TTTGATGCTG CTCAAGCAAC GATGTCTGAT GCTATGAAGC AAACTAAAAG CCAAGAAATT GCTAACGTAG AGAATGATAT AATGCAGTTT AGAAAAAATG GTTCTCAATT GTTAAGTTTA AGAAGAGATC AACTTTTAGC GCCTTTGTAC CAACGTATAG GTAAAGCTTT AGATGCTGAA GCTAAAGCAC AAAACTATTC TCAGGTTTTA AACATAGGTT CTGGAGCATT AGGCTATGCC GATCCAAAAT TTGATGTTAC AGAAGCTGTA ATGAAACGTA TGGGAGTTAC TATTAAACAA CAGCAACCGC AAGGACAGAA TTAA
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Protein sequence | MKNILLAAFF IVTTTVSMAQ SKVGTVDVDF ILTNMTDELK KVNDSLANYE ASLSAQLQTK MTDYETKYKA FDAAQATMSD AMKQTKSQEI ANVENDIMQF RKNGSQLLSL RRDQLLAPLY QRIGKALDAE AKAQNYSQVL NIGSGALGYA DPKFDVTEAV MKRMGVTIKQ QQPQGQN
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